Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1658 ATGTATAGTGTTAAGTTTCATTGGAAAGTATTGAGTTTGTTGATTTCAGTTTTATATTGCTTAGGAGACAATGACATACAAGTTGAGTTGAATGATGATGTTCTTGGTTTGATTGTGTTCAAATCAGATCTTAATGACCCTTTTTCATATCTTTCTTCATGGAATGAAGATGATGTGAATCCATGTTCATGGAAATTCATAAAATGCAATCCTCAAAATGGAAGAGTTTCTGAGTTATCATTAGATGGATTAGGATTATATGGTAAACTAGGAATAGGCCTTGAAAAGTTGCAGCATCTTAAGGTATTGTCCCTTTCTCATAACAATTTCAGTGAAATTATTAGTCCAACACTTACTCTTTCTAGTAGTATTCAAAGGTTGAATCTTAGTCATAATGGTTTTTATGGTCTTATACCTATTTCTTTTGTGAATATGAGTTCAATAAGGTTTCTTGATCTATCAGATAATTCATTATCAGGAACAATTCCTAACAAGTTTTTTGATAGCTGCAATTCACTTCATTACCTTTCTTTAGGTGGGAATATGTTTGATGGGTCAATTCCTAGTACAATTTCTAGATGTTTGTCATTGAATAGTCTTAATCTTTCGAAAAATTGGTTCGCTGGGTATGTCGATTTCGATGTGTTTTGGTCATTAAACAGACTTAGGAATTTGGATCTGTCAAATAATGCTTTGTCTGGTTACTTACCTAATGGAATTTCAGCTATACATAACTTGAAAGAGATTTTGTTACATGGTAACAAGTTTTCGGGTTCATTACCTAATGATATTGGACTATGCCTGCATTTGAATAGATTGGATATTAGTGATAATCAATTCAGTGGTGAGTTACCAGAATCACTTGGGAGGCTTAATTCTTTGAGATATTTCAAGGCATCAAATAATGTTTTAACCGGTGAATTGCGGCAGTGGATCGGTAACATGACCAGTCTGGAATATCTTGAGCTTTCGAACAATCAATTCACTGGAAGGATACCACAGTCAATGGTTTCATGCAAAAAGTTATCCGTGATCAGGCTAAGAGGTAATGGTTTCAACGGAAGCATACCGGAAGGTTTGTTCGGTTTAGGATTGGAGGAAATAGACTTTTCCGACAATGATCTGATAGGTTCAATTCCATCAGGCTCAAGCAGGATATCGGAAACACTAACCAATTTGGATCTTTCGAAGAACCATCTCCAAGGAATAATCCCTGCAGAAATTGGTCTTCTTTCAAAACTTCAATACTTTAATGTGTCTTGGAATGATCTTCATTCACAAATACCTCCAGAATTTGGTCTCCTTCAGAATCTAACAGTTTTAGATCTTCGTAACATCGCCGCGTATGGTCCTATTCCAGCCGATATATGCGATTCACACAATTTAGCCATTCTTGAACTTGACGGAAATTCATTAAAAGGGTCTATTCCACAAGAGATTGGAAATTGTTCATCTCTTTACTTATTGAGTTTGTCACACAATAATTTGACAGGTACAATTCCAAGGTCAATTTCAAAGCTTAATAAACTCAAAATCCTTAAATTGGAATTCAATGAACTAAGTGGAGAAATGCCAATGGATCTCGGAATGCTTCAAAATCTTCTTGCTGTGAATATATCATATAACAGGCTCAATGGAAGGCTTCCAACTAGTACCATATTTCAGAACTTGGACAAAAGTTCAATGGAAGGAAACTTTGGTCTATGTTCACCTTTACTTAAGGGTCCATGTAAGATGAATGTGCCGAAGCCGCTAGTGCTTGATCCGAATGGACATAACGACCGAATAGGTCCTAATAGGGATAGAAATGAATCATCTATGCCTAACACAATTCATCACCACAGGTTCCTTAGTGTTTCTGTCATTGTAGCAATTTCAGCATCCTTTGTTATCATGTTAGGAGTGATTGCTATTTGTCTAGTTAATGTTTCGGTGAGGAAAAGGCTATCGTTTGTGGATACCGCGTTGGAAAGCATGTGCTCAAGCTCTTCGAGATCGGGATGTCCACCGTCGGGAAAACTTATTCTGTTTGATTTGCGTTCCTCGCTTGACGGGATCGGCAATCCAGAATCCTTGCTCAACAAGGCATCTGAGATTGGAGAAGGGGTCTTTGGAACAGTTTACAAGATTCCACAAGGATCACATTGCAGAGCGCTAGCGATGAAGAAGCTTATAACCTCGAACATAATCCAATATCCCGAAGACTTTGACAGGGAAGTTCGAATCCTAGGAAAAGCTCGGCACCCGAATCTAATAGAACTGAAAGGATACTACTGGACTCCTCATATGCAGATTTTAGTAACAGAATATGCACCAAATGGTAGCTTGCAATCCAAGCTACATGAGAGGCTTCCTTCAACTCCTCCTCTTTCATGGCCTAACAGATTCAAGATTTTGTTCGGAACAGCAAAGGGACTTGTTCATTTGCATCATTCATACCGTCCACCGATCGTCCACTACAACATAAAGCCAAGCAACATTCTACTCGACGAAAACTACAACCCAAAGATATCGGATTTCGGGTTGGCTCGGCTTCTAAAAAATCTCGACAAACATGTGATGAGCAATAGGTTTCAAAGTGCACTAGGATATGTTGCACCAGAATTAGCATGTCAGGGCTTAAGGGTCAATGAGAAATGTGATGTGTATGGTTTCGGAGTAATGATCCTCGAATTAGTGACCGGTCGGAGGCCGGTGGAGTACGGAGAAGATAATGTATTGATACTGAATGACCATGTGAGGGTGTTACTTGAAGAAGGTAATGTATTGGAATGTGTGGATCCAACAATGAATGAGTATCCAAAAGATGAAGTACTTCCAATTCTCAAACTTGCAATGGTATGCACTTCTCAAATACCTTCAAGTAGGCCTTCTATGACAGAAGTTCTGCAAATACTTCAACTCATTATAACTCCACTTCCTCATACAATGGAACTCTTCTAA 2943 0.3816 MYSVKFHWKVLSLLISVLYCLGDNDIQVELNDDVLGLIVFKSDLNDPFSYLSSWNEDDVNPCSWKFIKCNPQNGRVSELSLDGLGLYGKLGIGLEKLQHLKVLSLSHNNFSEIISPTLTLSSSIQRLNLSHNGFYGLIPISFVNMSSIRFLDLSDNSLSGTIPNKFFDSCNSLHYLSLGGNMFDGSIPSTISRCLSLNSLNLSKNWFAGYVDFDVFWSLNRLRNLDLSNNALSGYLPNGISAIHNLKEILLHGNKFSGSLPNDIGLCLHLNRLDISDNQFSGELPESLGRLNSLRYFKASNNVLTGELRQWIGNMTSLEYLELSNNQFTGRIPQSMVSCKKLSVIRLRGNGFNGSIPEGLFGLGLEEIDFSDNDLIGSIPSGSSRISETLTNLDLSKNHLQGIIPAEIGLLSKLQYFNVSWNDLHSQIPPEFGLLQNLTVLDLRNIAAYGPIPADICDSHNLAILELDGNSLKGSIPQEIGNCSSLYLLSLSHNNLTGTIPRSISKLNKLKILKLEFNELSGEMPMDLGMLQNLLAVNISYNRLNGRLPTSTIFQNLDKSSMEGNFGLCSPLLKGPCKMNVPKPLVLDPNGHNDRIGPNRDRNESSMPNTIHHHRFLSVSVIVAISASFVIMLGVIAICLVNVSVRKRLSFVDTALESMCSSSSRSGCPPSGKLILFDLRSSLDGIGNPESLLNKASEIGEGVFGTVYKIPQGSHCRALAMKKLITSNIIQYPEDFDREVRILGKARHPNLIELKGYYWTPHMQILVTEYAPNGSLQSKLHERLPSTPPLSWPNRFKILFGTAKGLVHLHHSYRPPIVHYNIKPSNILLDENYNPKISDFGLARLLKNLDKHVMSNRFQSALGYVAPELACQGLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEEGNVLECVDPTMNEYPKDEVLPILKLAMVCTSQIPSSRPSMTEVLQILQLIITPLPHTMELF 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1658 980 Gene3D Transferase(Phosphotransferase) domain 1 775 973 - -
Lal6g1658 980 Pfam Protein kinase domain 695 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1658 980 SUPERFAMILY L domain-like 43 380 - -
Lal6g1658 980 Pfam Leucine Rich Repeat 317 336 IPR001611 GO:0005515
Lal6g1658 980 Gene3D Phosphorylase Kinase; domain 1 693 774 - -
Lal6g1658 980 PRINTS Leucine-rich repeat signature 148 161 - -
Lal6g1658 980 PRINTS Leucine-rich repeat signature 219 232 - -
Lal6g1658 980 Gene3D Ribonuclease Inhibitor 29 167 IPR032675 -
Lal6g1658 980 SMART LRR_typ_2 315 339 IPR003591 -
Lal6g1658 980 SMART LRR_typ_2 145 169 IPR003591 -
Lal6g1658 980 SMART LRR_typ_2 97 120 IPR003591 -
Lal6g1658 980 SMART LRR_typ_2 219 242 IPR003591 -
Lal6g1658 980 SMART LRR_typ_2 531 556 IPR003591 -
Lal6g1658 980 SMART LRR_typ_2 243 267 IPR003591 -
Lal6g1658 980 SMART LRR_typ_2 411 434 IPR003591 -
Lal6g1658 980 SUPERFAMILY L domain-like 292 563 - -
Lal6g1658 980 PANTHER BNAA09G02190D PROTEIN 11 976 - -
Lal6g1658 980 Gene3D Ribonuclease Inhibitor 451 579 IPR032675 -
Lal6g1658 980 ProSiteProfiles Protein kinase domain profile. 693 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1658 980 SUPERFAMILY Protein kinase-like (PK-like) 693 974 IPR011009 -
Lal6g1658 980 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Lal6g1658 980 Gene3D Ribonuclease Inhibitor 168 260 IPR032675 -
Lal6g1658 980 Gene3D Ribonuclease Inhibitor 261 362 IPR032675 -
Lal6g1658 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 976 - -
Lal6g1658 980 Gene3D Ribonuclease Inhibitor 363 450 IPR032675 -
Lal6g1658 980 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lal6g1658 980 CDD STKc_IRAK 699 969 - -
Lal6g1658 980 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Lal6g1658 980 Pfam Leucine rich repeat 461 520 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1658 Lal-Chr6 19350957 19354284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1658 22 977 Receptor kinase-like Gene Family AT3G28040 60.444 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lal6g1658 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1658 - - gmx:100795810 1484.54