Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1645 ATGGTTGTCGAGCAGAAAGTGTTACTGGTCGCAAACCCTATTAACGGCGAAACTGACGGCGCCGTCGAATTTAACGGCACACCACTTACTTCCGCCGTGTACGGCGGCGGAGATGATGGGAGACCAGCGGGGAGGTTGCCACGTTGGACAAGGCAAGAAATCCTTGTTCTTATACAAGGAAAAACCGACGCTGAGAACCGGTTCAGACCGGGTCGTGGTTCCGGTTCAGCTTTCGGTTCAGCTGAACCGAAATGGGCATCGGTTTCGAGTTACTGTAAGAACCATGGAGTGAACCGGGGACCGGTTCAGTGCAGGAAGCGTTGGAGCAACTTGGCTGGTGATTATAAGAAGATTAAGGAATGGGAGAATCAGATAAAGGATGAAACGGAGTCGTTTTGGGTTATGAGGAATGATTTGAGGAGAGAGAGAAAATTACCTGGTTATTTTGATAGAGAAGTTTATGATATTCTTGGTGCTGATTCTCCGGCGGCGGCGGCGGCGGCGGCGGTGGAGAAGGTGGTAGGTGATGTGGAGGTGCATATTTATGATAGTAATAGAAGGGTTGGGAGTGATGATGGGTTGTTTTCTGATACTGAGAGGGATGAGGTTTTGGTTGTTAAGGATGTTCCTTCTCCTGTTCCTGTCTCAGAAGGTGAGCCTCCACGCAATGGCATGGAGAAGCAATATCAACCCCTCCTCCTTCTCCAAGGCTGCTCCGGAGAAGGCAATGGTCAAGATGCTACCAATAACAAACAGCACTCTTCAAATCCAGAAACCGGTTCTACATCTCAAGAGGGGCGGAAGAGGAAGCGGTATGCAACCGACCGAGAAGAGGAAACTCTGCACAGTCAATTGATTGATGTCTTCGAAAGAAATGGCAAGATGCTACAAGATCAACTTGAAGCTCAGAACATCAATTTTCAGTTGGATCGGCAGCAACAGAAAGACACGGCAAGCAACATCGTCGCTGTACTCGATAAGCTTGCCGATGCTCTAGGGAGAATTGCTGACAAACTGTAG 1020 0.4892 MVVEQKVLLVANPINGETDGAVEFNGTPLTSAVYGGGDDGRPAGRLPRWTRQEILVLIQGKTDAENRFRPGRGSGSAFGSAEPKWASVSSYCKNHGVNRGPVQCRKRWSNLAGDYKKIKEWENQIKDETESFWVMRNDLRRERKLPGYFDREVYDILGADSPAAAAAAAVEKVVGDVEVHIYDSNRRVGSDDGLFSDTERDEVLVVKDVPSPVPVSEGEPPRNGMEKQYQPLLLLQGCSGEGNGQDATNNKQHSSNPETGSTSQEGRKRKRYATDREEETLHSQLIDVFERNGKMLQDQLEAQNINFQLDRQQQKDTASNIVAVLDKLADALGRIADKL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1645 339 MobiDBLite consensus disorder prediction 241 262 - -
Lal6g1645 339 CDD GT1 47 119 - -
Lal6g1645 339 Pfam Myb/SANT-like DNA-binding domain 48 135 IPR044822 -
Lal6g1645 339 MobiDBLite consensus disorder prediction 263 278 - -
Lal6g1645 339 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 17 339 - -
Lal6g1645 339 Gene3D - 49 117 - -
Lal6g1645 339 MobiDBLite consensus disorder prediction 236 278 - -
Lal6g1645 339 ProSiteProfiles Myb-like domain profile. 41 112 IPR001005 -
Lal6g1645 339 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 17 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1645 Lal-Chr6 19224680 19228672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1645 48 120 Trihelix Transcription Factor Family AT1G33240 32.877 1.05e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal6g1645 Myb_DNA-bind_4 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1645 - - gmx:100788594 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1645 6 19224680 19228672 Lal6g1645 6 19224680 19228672 ECH
Lal18g0570 18 4782810 4786660 Lal6g1645 6 19224680 19228672 LSH