Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1641 ATGTTCCCTTCTACTTACATCTCTTCAGGCCCTTACCCTTATTTCCCTTCATCTTCTTCATCATACCATCCTTTTGCTTTCTTTAACCCTGAAAATGGTTCTTCAAACAACACTTTTTCTCATGATCCACTTTCTTTTCCCTATAACACTTCAACTACTCATCATTATCATGCTCCAATCCCAGAAACAGTTGCTAATTTTGCAGATTGTGCTGGTTCAGCTGCAATGTTCAAAAATGATGTTAGTGGTTCAAATTTTGGCTTCTCCAATTTTATGGCTAAGAAACCTGCTCCAAAGAAAGACAGGCATAGCAAGATCCACACATCACAGGGTTTGAGGGACAGAAGGGTGAGATTGTCGATCGAGATCGCGCGAAAGTTCTTTGATCTTCAAGATATGTTAGGGTTTGACAAAGCCAGTAACACACTTGAGTGGCTCTTCAACAAGTCAAAGAAAGCAATGAAAGAATTGGCTAGAAGCAAAAACAGTAGCAGTGGTGTTGTTGCAAATAGCTTCTCCTCTTCTGATTCGGAGTGTGAAGTGGTTTCAATGATAAACCAAGATTCCATTGATGCTACTCCAGAAGGAGTAGTGGTAGATTCAAAAGAGAGGAAGCTGAAAAGGGCAAAGATTAAGGAATCAAGGGAAAAAGCTAGAGCAAGAGCAAGGGAAAGGACTAATAAAAAGATGTTCAACACAACTATCATGATGAAGAAAAAATGTGCTGCAACTGAAAACCCTCAAATGTTTAACCAATTGAAGCCACCCTTTCATCACACTGAGAATTCGGCGAAATCGCCGAATAATAAGTTGGTTCCATCTCATCATCATCATCCTCATCCTCATCCTGTGTGTAATGAAATTCCTCGAGAAGATTTCAATCTTTTCGAGGAGTCCATTGTGATCAAGAGAAAATTGAAGCAATCCTTGATGTCTTCTCCTCACAACCAAAACCATGTGATCCCTAAGGAATCAAGTTTCAATAACAATACTGAACACCACTCCTTCCCTATTTTATCTCCAAATTTGGATGCTAATAATGGTGCTAATGGCAGATCCAATTTCTCTGCAGTAGCCAACATGAATCTATCTACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGA 1131 0.397 MFPSTYISSGPYPYFPSSSSSYHPFAFFNPENGSSNNTFSHDPLSFPYNTSTTHHYHAPIPETVANFADCAGSAAMFKNDVSGSNFGFSNFMAKKPAPKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKKAMKELARSKNSSSGVVANSFSSSDSECEVVSMINQDSIDATPEGVVVDSKERKLKRAKIKESREKARARARERTNKKMFNTTIMMKKKCAATENPQMFNQLKPPFHHTENSAKSPNNKLVPSHHHHPHPHPVCNEIPREDFNLFEESIVIKRKLKQSLMSSPHNQNHVIPKESSFNNNTEHHSFPILSPNLDANNGANGRSNFSAVANMNLSTGLQIFGKSWEE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1641 376 MobiDBLite consensus disorder prediction 257 281 - -
Lal6g1641 376 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Lal6g1641 376 ProSiteProfiles R domain profile. 212 229 IPR017888 -
Lal6g1641 376 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 20 376 - -
Lal6g1641 376 Pfam TCP family transcription factor 98 230 IPR017887 -
Lal6g1641 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 376 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1641 Lal-Chr6 19134796 19136403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1641 41 344 TCP Transcription Factor Family AT1G67260 32.622 9.57e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal6g1641 TCP 2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1641 - - gmx:100786452 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1641 6 19134796 19136403 Lal19g1416 19 16864961 16866872 ECH
Lal6g1641 6 19134796 19136403 Lal7g1307 7 18425551 18427032 ECH
Lal6g1641 6 19134796 19136403 Lal14g1863 14 18152958 18154429 ECH
Lal6g1641 6 19134796 19136403 Lal6g1641 6 19134796 19136403 ECH
Lal24g1302 24 14355925 14357941 Lal6g1641 6 19134796 19136403 ECH
Lal22g1320 22 16025288 16026476 Lal6g1641 6 19134796 19136403 LSH