Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1631 CACGCCGCTGACAACGATCGCAAGATGTCATCTCTACAAGAACTTGTTAATAATTTGTCCAGCTCTGATGTCCGTGAACAAGCTCTTTTTGAGCTCTCAAAGAGGACAGAATTATTTGATGATCTTGCTATATTATTGTGGACTACTCCTACCGTCATGACAGCACTTTTACAGGAAATAATTGCTATTTACCCTGATCTTTCAAATGAAGCTCTTACTTTGGCACAATCTAATAAAGTGTGCAATGTTCTTGCTCTTTTTCAGTGTGTAGCATCTCACCCTGCTACAAGGATGCCATTCATGAGTGCTCAAATGCCAATATATGTGTACCCCTTGCTCAATACAAGATTCAAGTCTAAACCATTTGAGTACTTGAGGCTTGCTAGTGTTGGTGTCATTGGTGGCTTAGTGAAGGTTGATGATACTGAAGTTATAAGTTTCCTTACTTCCACAGAAGTAATGCCTATGTGCCTATGCACAATGGAAGTAGGTTCTGAACTTACAAAAACAGTTGAGTTTCCTGATTCTTGA 531 0.3955 HAADNDRKMSSLQELVNNLSSSDVREQALFELSKRTELFDDLAILLWTTPTVMTALLQEIIAIYPDLSNEALTLAQSNKVCNVLALFQCVASHPATRMPFMSAQMPIYVYPLLNTRFKSKPFEYLRLASVGVIGGLVKVDDTEVISFLTSTEVMPMCLCTMEVGSELTKTVEFPDS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1631 176 Pfam Cell differentiation family, Rcd1-like 15 171 - -
Lal6g1631 176 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 9 8 171 IPR007216 GO:0006402|GO:0030014
Lal6g1631 176 Gene3D - 4 173 IPR011989 -
Lal6g1631 176 PANTHER UNCHARACTERIZED 8 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1631 Lal-Chr6 18996792 18999800 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Lal6g1631 Rcd1 7.3e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1631 K12606 - oeu:111395739 224.942