Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1624 ATGGAGAATCCAAGATTTGTACCTCTTATTTGCTTTGTTTCATTTTTCTTCTTTTGGACCTTCACAAATGCTTTGCTCAATCCTAAAGGTGTAAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAAATTGTCTAGTGGATCCACATGGTGTTTTAGATAATTGGGATGGTGATGCTGTTGATCCATGTAGTTGGACTATGGTTACTTGTTCTTCTGAAAACTTGGTCATTGGATTGGGCACCCCAAGTCAAAGTTTATCTGGTACTCTATCTCCAAGCATTGGCAACTTAACCAACCTTCAAATTGTGCTGCTACAGAATAATAACATAACTGGATCAATTCCTTCAGAGCTTGGAAAACTTTCTAAGCTTCAAACTCTTGATCTCTCTAATAACTTCTTTAGTGGTGAAATTCCTTCCTCTTTGGGTAACTTGAAAAGCCTCCAATACCTGAGGGTCAATAATAACAGTCTTGTTGGTGCATGCCCAGAATCACTGGCTAATATGACACAGCTAGCTTTTCTTGACTTGTCCTACAATAATATTAGTGGCCCTGTACCAAGAATTTTGGCTAAATCATTCAACATTATTGGAAACCCTCTTGTTTGTTCTACTGGAAAAGAACCAAACTGCCATGGAATGATGACATTGATGCCTATGTCAATGAACTTAACCATCACCCAGGATGGTTTATCATCAGGAAAACCGAAAACTCACAAAATGGCGATCGCTTTCGGCTTGAGCTTAGGTTGCCTCTGCCTTATAGTTCTTGGTTTTGGACTTTTTCTTTGGTGGAGGCACAAGCAAAATAAACAAGCATTCTTTGATGTTAAAGACCGACATCACGAAGAAGTGTACCTAGGAAACTTGAAGATGTTCCAATTCAGAGAACTTCAGATTGCTACTCACAACTTTAGCAGCAAACACATACTTGGAAAGGGTGGTTTTGGAAATGTGTACAAAGGAGTTCTCTCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCGCAGGCGGAGAGATACAATTTCAAACAGAAGTCGAAATGATCAGTCTCGCCGTGCACCGAAATCTTCTTCGACTATATGGATTTTGTGTGACACCAACAGAAAGACTATTAGTGTACCCTTACATGTCAAATGGTAGTGTCGCTTCGCGTCTCAAGGGTAAGCCGGTCCTGGATTGGGGTACAAGGAAGCAAATTGCCTTAGGAGCTGCAAGAGGACTATTGTACCTTCATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTAAAAGCTGCAAACATATTGCTTGATGATTATTGTGAAGCAGTAGTTGGAGATTTCGGATTGGCGAAGTTATTGGATCATCAAGATTCACATGTTACAACTGCAGTCAGAGGCACTGTAGGGCACATTGCCCCTGAGTATTTATCCACAGGACAATCCTCTGATAAAACTGATGTCTTTGGATTTGGCATTCTCTTACTTGAATTGATCACAGGCCAAAAGGCTCTAGAATTCGGAAAAGCGTCTAACCAAAAAGGAGCCATGCTCGATTGGGTAAAGAAAATCCATGTGGAGAAGCTTGAATTGCTTGTTGACAAGGATCTGAAGAGCAACTATGACAGGATTGAGCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATATCTTCCGAGCCATCGACCGAAAATGTCGGAAGTAGTACGAATGCTTGAAGGTGATGGACTAGCAGAGAGATGGGAAGCTTCACAAAAAGCTGATACTTCAAAGTGCAAACCACATGAGTCCTCATTATCAGATAGATATTCTGATCTTACTGATGATTCTTTACTTCTAGTCCAAGCAATGGAGCTATCAGGACCAAGGTGA 1875 0.4091 MENPRFVPLICFVSFFFFWTFTNALLNPKGVNFEVQALMGIKNCLVDPHGVLDNWDGDAVDPCSWTMVTCSSENLVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGSIPSELGKLSKLQTLDLSNNFFSGEIPSSLGNLKSLQYLRVNNNSLVGACPESLANMTQLAFLDLSYNNISGPVPRILAKSFNIIGNPLVCSTGKEPNCHGMMTLMPMSMNLTITQDGLSSGKPKTHKMAIAFGLSLGCLCLIVLGFGLFLWWRHKQNKQAFFDVKDRHHEEVYLGNLKMFQFRELQIATHNFSSKHILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAAGGEIQFQTEVEMISLAVHRNLLRLYGFCVTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGQKALEFGKASNQKGAMLDWVKKIHVEKLELLVDKDLKSNYDRIELEEMVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAERWEASQKADTSKCKPHESSLSDRYSDLTDDSLLLVQAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1624 624 ProSiteProfiles Protein kinase domain profile. 305 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1624 624 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Lal6g1624 624 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Lal6g1624 624 SUPERFAMILY L domain-like 34 196 - -
Lal6g1624 624 SUPERFAMILY Protein kinase-like (PK-like) 282 574 IPR011009 -
Lal6g1624 624 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Lal6g1624 624 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 10 624 - -
Lal6g1624 624 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Lal6g1624 624 MobiDBLite consensus disorder prediction 584 604 - -
Lal6g1624 624 Pfam Protein kinase domain 306 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1624 624 Gene3D Transferase(Phosphotransferase) domain 1 382 593 - -
Lal6g1624 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 624 - -
Lal6g1624 624 SMART serkin_6 305 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1624 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Lal6g1624 624 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1624 Lal-Chr6 18854183 18858302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1624 1 624 Receptor kinase-like Gene Family AT5G16000 76.056 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal6g1624 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1624 - - gmx:100798412 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1624 6 18854183 18858302 Lal6g1624 6 18854183 18858302 ECH