Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1613 ATGACAATTGGAAATCTAGCACCAAAGTCAGAGAATAAGAGATCAAGGAAGAACAAAGCAGTTATTGATGAGAATGCACCCTTATTGCCTAAAACTCATGATAATGATGGTGGTTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCAGTTTTTAACTTATCTACCACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACTTTGAGAGAGTTGGGGATGGTGCCTGGTCTTGTTGCAATAATCTTTATGGCTTTTTTGACTGAGAAATCAATTGAGTTCTTGATTAGGTTCACAAGGGCAGGGAAATCTTCCTCTTATGCAACTTTGATGGGTGATTCCTTTGGGATATATGGAAAAGCTCTTATCCAACTATGTGTTATAGTCAATAACATCGGCGTGCTGATTGTTTACATGATTATTATCGGTGATGTGCTTTCTGGAACATCTGCAAGTGGAAAACATCATCCCGGTATCTTTGAAGGATGGTTTGGTGCGCACTGGTGGACAGGGCGGACATTTATTGTCCTTTTAACAACACTTGCTATATTTGCACCACTGGCAAGCTTTAAGCGAATTGATTCGTTGAGATTCACATCTGCCCTTTCAGTTGGTCTAGCAGTCGCTTTTCTTGTTATTGCTGTCGGAATCTCAATTGTCAAGATTTTAAGTGGAGGCATCGGGATGCCCAAACTATTTCCGGATGTTACTGATGTGACATCGGTGTTTAATCTGTTTACTGTAGTCCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACACAATAGACAATGAACTTGAGGACTCCTCACAGATACAAGGGGTTGTAAGAACTTCCCTTGCTCTATGCTCTTCAGTGTACATAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTGGATGATGTCCTTGCCAATTTTGATACCGATCTTGGAATTCCTTTCAGTGCTGTGCTTAACGATGCTGTTCGTTTAAGCTACGCAGCACATCTCATGCTTGTATTTCCGGTTGTCTTCTTTCCGTTGCGGCTCAACATAGATGGTCTCCTCTTTTCAAAATCAAAGCCTTTGGTTATGGATAACTTCAGATTTGCATCACTCACTATTTCCCTTATTAGTGTTATCTTCCTTGGAGCAAATTTCATCCCTAGCATTTGGGATGCCTTCCAGTTCACCGGCGCAACCGCTGCAGTTTGTATAGGATTCATATTTCCAGCTGCCATCATTCTTAGGGACCGATACAATATAGCAACTAAAGGAGACAAGATTTTGTCGGTATTTATGATAGTTGTTGCAGTCGCCTCAAACGCTGTGGCTATATACAGCGATGCCTATGCCTTGATCAAGCAGAATAAAACTTCACGCGAATGA 1392 0.4138 MTIGNLAPKSENKRSRKNKAVIDENAPLLPKTHDNDGGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLRELGMVPGLVAIIFMAFLTEKSIEFLIRFTRAGKSSSYATLMGDSFGIYGKALIQLCVIVNNIGVLIVYMIIIGDVLSGTSASGKHHPGIFEGWFGAHWWTGRTFIVLLTTLAIFAPLASFKRIDSLRFTSALSVGLAVAFLVIAVGISIVKILSGGIGMPKLFPDVTDVTSVFNLFTVVPVFVTAYICHYNVHTIDNELEDSSQIQGVVRTSLALCSSVYIMISFFGFLLFGEGTLDDVLANFDTDLGIPFSAVLNDAVRLSYAAHLMLVFPVVFFPLRLNIDGLLFSKSKPLVMDNFRFASLTISLISVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAIILRDRYNIATKGDKILSVFMIVVAVASNAVAIYSDAYALIKQNKTSRE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1613 463 PANTHER AMINO ACID TRANSPORTER 7 458 - -
Lal6g1613 463 Pfam Transmembrane amino acid transporter protein 45 448 IPR013057 -
Lal6g1613 463 MobiDBLite consensus disorder prediction 1 26 - -
Lal6g1613 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1613 Lal-Chr6 18678035 18682110 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1613 3 463 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.330 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1613 K14207 - gmx:100796345 773.467