Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1608 ATGTTAATTCGAAATGTAGAACCTGAGCCAGAGAATAATAGAGCAGGGAATAATTACATTGCAGTAGTTGATGAAAATGCACCTTTATTAAGACATGATAATGATGCTGGTTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCAGTTTTTAACTTATCTACCACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACTTTGAGAGAGTTGGGGATGGTGCCTGGTCTTGTTGCAATAATCTTTATGGCTTTTTTGACTGAGAAATCAATTGAGTTCTTGATTAGGTTCACAAGAGCAGGGAAATCTTCCTCTTATGCAACTTTGATGGGTCATTCCTTTGGGATATATGGAAAAGCTCTCATCCAACTATGTGTTATAGTCAATAACATTGGCGTGTTGATTGTTTACATGATTATTATAGGTGATGTGCTGTCTGGAACATCTGCAAATGGAAAACATCATCCCGGTATCTTTGAAGGATGGTTTGGTGCGCATTGGTGGACAGGGCGAACATTTGTTGTCCTTTTAACAACACTTGCTATATTTGCACCACTCGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACTTCTGCCCTTTCAGTTGGTCTAGCAGTCGCTTTTCTTGTTATTGCTGTCGGAATCTCAATTGTCAAGATTTTAAGTGGAGGCATCAGGATGCCCAAACTATTTCCGGATGTTACTGATGTGACATCGGTGTTTAATCTGTTTACTGTAGTCCCTGTGTTCGTGACTGCCTATATCTGCCACTACAATGTTCACACAATAGACAATGAACTTGAGGACTCCTCACAGATACAAGGGGTTGTAAGAACTTCCCTTGCTCTATGCTCTTCAGTGTACATAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTGGATGATGTCCTTGCCAATTTTGATACCGATCTTGGAATTCCTTTCAGTGCTGTGCTTAACGATGCTGTTCGTTTAAGCTACGCAGCACATCTCATGCTTGTATTTCCGGTTGTCTTCTTTCCGTTGCGGCTCAACATAGATGGTCTCCTCTTTTCTAAATCAAAGCCTTTGGTTATGGATAACTTCAGATTTGCATCACTCACTATTTCCCTTATTAGTGTTATCTTCCTTGGAGCAAATTTCATCCCTAGCATTTGGGATGCCTTCCAGTTCACCGGCGCAACCGCTGCAGTTTGTATAGGATTCATATTTCCAGCTGCCATCATTCTTAGGTGA 1254 0.4075 MLIRNVEPEPENNRAGNNYIAVVDENAPLLRHDNDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLRELGMVPGLVAIIFMAFLTEKSIEFLIRFTRAGKSSSYATLMGHSFGIYGKALIQLCVIVNNIGVLIVYMIIIGDVLSGTSANGKHHPGIFEGWFGAHWWTGRTFVVLLTTLAIFAPLASFKRIDSLRFTSALSVGLAVAFLVIAVGISIVKILSGGIRMPKLFPDVTDVTSVFNLFTVVPVFVTAYICHYNVHTIDNELEDSSQIQGVVRTSLALCSSVYIMISFFGFLLFGEGTLDDVLANFDTDLGIPFSAVLNDAVRLSYAAHLMLVFPVVFFPLRLNIDGLLFSKSKPLVMDNFRFASLTISLISVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAIILR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1608 417 PANTHER AMINO ACID TRANSPORTER 12 416 - -
Lal6g1608 417 PANTHER AMINO ACID TRANSPORTER AVT6A 12 416 - -
Lal6g1608 417 Pfam Transmembrane amino acid transporter protein 44 414 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1608 Lal-Chr6 18650445 18653709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1608 2 417 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.182 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1608 K14207 - gmx:100796345 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1608 6 18650445 18653709 Lal6g1608 6 18650445 18653709 ECH
Lal18g0555 18 4685347 4689226 Lal6g1608 6 18650445 18653709 LSH
Lal22g1289 22 15636260 15639544 Lal6g1608 6 18650445 18653709 LSH
Lal12g1395 12 17041306 17046075 Lal6g1608 6 18650445 18653709 PCT
Lal6g1608 6 18650445 18653709 Lal12g1395 12 17041306 17046075 PCT