Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1582 ATGGACCTCTCTTTTATACCCAAAGCAACTTCATGCATATTGTTCTTCTTTCTTCTGTCTTGCACTTGCTTCATCGCAACAGGTGCTTATGATCCACATGACCCAAATGGAAACATCACTATCAAATGGGATATTATAAGCTGGACACCTGATGGTTATGTTGCTATTGTTACGATGAACAACTTCCAACAATATCGTCATATCGCGACACCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATTTGGAGCATGATGGGTGGAGAAACCACTGAACAAGGAGATTGCTCAAAGTTTAAGGAAACCCCTTCACATTGCTGTAAGAAGGATCCAACAATTGTTGATTTACTTCCAGGCACACCTTTCAATCAGCAAGTTGCAAATTGTTGCAAAGGTGGAGTACTAAGTTCATGGGCACAGGACCAAACCAATTCAGTTTCATCATTTCAAGTTAGTGTTGGTAGATCTGGAACAACAAATAAAACTGTCAAAGTGCCAAAAAACTTTACCTTAAAAGCACCAGGAACAGGTTATACTTGTAGTCCAGCAAAGATTGTCAAACCCAGTCTTTTCATTCAGGCAGATAAAAGGAGAGTGACTCAAGCACTCATGACTTGGAATGTGACATGCACATATTCACAATTTCTAGCTCACAAAAGTCCCACTTGCTGTGTTTCCCTCTCATCATTCTATAATGATACTATTGCACCATGCCCAACATGTGCATGTAGCTGCCAAGGCAACTCATCTCAGTCAGGGACTTGTGTCAATGGAAATACACCACATTTGGCATCAGTTGTTTCTGGAAATAATAATTTAGCACCTTTGGTCCAATGTACTAGTCATATGTGCCCTATCAGAATTCACTGGCATGTTAAGCTTAACTACATTGAATACTGGCGTGTGAAGGTTACTATTACTAATTTTAATTATATGATGAATTATTCTGATTGGAACATGGTTGTTCAACACCCAAACTTTGACAATGTGACTCAACTCTTCAGTTTCAACTACAAGTCATTGACTCCATATGAGAACATAAATGATACAGCAATGCTTTGGGGAGTGAAGTTCTACAATGATTTTCTTAATCAAGCTGGCCCTCTTGGTAATGTACAATCAGAGATACTCTTCAGAAAAGATAAATCAACTTTTACTTTTGACAAGGGTTGGGCTTTTCCTCAAAGAATCTATTTCAATGGTGATAACTGTGTTATGCCACCACCTGATGCTTATCCATGGCTACCTAATGCAGATTCTCGTCCACAAGTTTCTCTGATTTCTTTAGTAATGTCTTCTTTGGTAGCCTTGGTATTTCATGCATATGTTTAA 1341 0.3908 MDLSFIPKATSCILFFFLLSCTCFIATGAYDPHDPNGNITIKWDIISWTPDGYVAIVTMNNFQQYRHIATPGWSLGWTWAKKEVIWSMMGGETTEQGDCSKFKETPSHCCKKDPTIVDLLPGTPFNQQVANCCKGGVLSSWAQDQTNSVSSFQVSVGRSGTTNKTVKVPKNFTLKAPGTGYTCSPAKIVKPSLFIQADKRRVTQALMTWNVTCTYSQFLAHKSPTCCVSLSSFYNDTIAPCPTCACSCQGNSSQSGTCVNGNTPHLASVVSGNNNLAPLVQCTSHMCPIRIHWHVKLNYIEYWRVKVTITNFNYMMNYSDWNMVVQHPNFDNVTQLFSFNYKSLTPYENINDTAMLWGVKFYNDFLNQAGPLGNVQSEILFRKDKSTFTFDKGWAFPQRIYFNGDNCVMPPPDAYPWLPNADSRPQVSLISLVMSSLVALVFHAYV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1582 446 PIRSF COBRA 2 446 IPR006918 GO:0010215|GO:0031225
Lal6g1582 446 PANTHER COBRA-LIKE PROTEIN 5 445 - -
Lal6g1582 446 PANTHER PROTEIN COBRA 5 445 IPR006918 GO:0010215|GO:0031225
Lal6g1582 446 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1582 Lal-Chr6 18323429 18335001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1582 13 444 COBRA Gene Family AT3G02210 70.575 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1582 - - gmx:100783820 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1582 6 18323429 18335001 Lal6g1582 6 18323429 18335001 ECH
Lal24g1328 24 14587551 14590481 Lal6g1582 6 18323429 18335001 ECH
Lal13g1753 13 17082923 17085752 Lal6g1582 6 18323429 18335001 PCT
Lal24g1328 24 14587551 14590481 Lal6g1582 6 18323429 18335001 PCT