Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1580 ATGGTGAGCTTTAGACAGAACAATGTTCACTGTACAAACCCATCATCAATCATTAACCTCTTCTTCTTCTTCTTCTTCTTACTACTACCATATTCCTTCCTTCTTCAACCTTTGTTCACTATGCAAGTTTCTTCATACAACCCTATTGATGATTTTGCTGTGAACTGTGGATCCATTGAAGATATTACCTTTCAAAATCGTACCTGGGTTGGAGACAAAAACTCAATCCTATTTGCTTTCTCTGAACCACAAAATGAAAAACCATCATTCATAGCTAAACCTATTGACCTATCTTCAATAAGTTCAGTTCCATTATTTGACACTGCACGCTTCTCTAATTCTGAATTCACATACTCTTTTCATGTCTCCGATGGACCAAAATTCATTCGTTTTCACTTTTATCCAAACTCATATTCCAACACCAATTCCTCCTTTGAATCTTACAACTCACTCTTCTCTGTCAAAGTAGACAACTTTACCCTCCTCAAAGACTTTAATGCTTCACTATGGCTACCCAAAATTGGTGAAAAAACCTTCTTCTTAGAGTATTGTATCAATGTTGGAACAGATCAGAATACCCTAAACTTAACCTTCTTTCCATCCACTAATTCTTATGCTTTTATCAATGGGATTGAGGTTGTGTCTATGCCTCCTTTCCTCTACTACACAAATGTTTCAGTTGACCTAGGGTTTCCTCTTGTGGGTCATGGTAGCTCGTACCATCTTGAAAACAACAAAGCTTTGGAGACACGTTACAGAATCAATGTAGGGAACACAGGAATTCAACCTAGTGAAGACACTGGTATGTTTCGAAATTGGGATAGTGATATCAATTACATATTGAAGCAGTATAATAATAGTGTATCATCTGGTTTTGGACTTCAACTAAACTATAAAGGTTATCCTGATTATATTGCACCAGCCAATGTATACTTAACTGCTCGTAATTATGGAAAGAATCCAACTGAAAACTACAACGTCACATGGAATTTTGAAGTAGACACAGAATTTCTTTATATGGTAAGGTTGCATTTTTGTGAGTTTGTTAAAAATATTACAAAAGTTGGAGATAGAGTTTTCCAAATTTTCATAGATGATACTTTGGTTGAAGGAAACGCTGATTTGATGGAATGGAGTGGTGGGAACCGCTTAGTCCCAATTCATAAGGACTATGCTTTGTTAATGTTAAACAAAACAGAAAAGTTGAAGAAACACACACTTTCTATCAAGCTTCAACGAGTGTTAAGTGGGTACTCTGATGTTATATTAAATGGCATCGAGATTTTTAAGATAAGTGATGGTAATAGTAATCTCGCAGGACCAAACCCTGATCCAGTTTCTTCTCCACCTCAAATATTGCAACCATTGAACAAAACATCAAAAAACATAACCAAAAGAAAGGTTGTGATTATTGCTGTGGTTGTAGTTTCATGCCTTGTGCTGGTTTCTTTATTGGGTAGCATCATAATTTTTATGAGAAGGAAAAGAGGTATTGATGAGAATGAGGAAAAGTCAAGTTGGAAAAGTAAGAATGAAGGGTCAACATTGCCTTCTCATTTGTGCCGCTACTTCACAATAGGAGAGATTAGAGCTTCTACACATAACTTTGATGAAGTCTTCATCATTGGAATTGGAGGCTTTGGCAACGTGTACAAGGGTTACATTGATGGAGCCACACCAGTAGCCATTAAGCGACTCAAACCTGGGTCACAGCAAGGTGAAAACGAGTTCATGAACGAGATTGAGATGCTCTCACAACTAAGACATCTTCATTTGGTTTCCCTCATTGGATACTGTAACGAGAATTCAGAGATGATTCTTGTTTATGATTTCATGCACCGTGGCACTCTCCATGATTATCTCTACAACACAAACCACCAACCTCTTCCATGGAAGCAAAGACTCAATATCTTATTAGGTTCAGCAAGAGGTCTCCACTATCTTCATTCAGGTGCAAAGCACAATATCATTCATCGTGATGTGAAAAGCACTAACATCTTGCTTGATGAAAAATGGGTTGCAAAAGTTTCAGACTTTGGTTTATCCAAAGTAGGACCCAGTGATATTTCTATGACCCATGTTAGCACTGTTGTGAAAGGAAGCATTGGGTACTTCGACCCAGAATACTACAAGAGACAAAGGTTAACATTGAAATCTGATGTTTACTCTTTTGGTGTTGTGTTGCTTGAGGTATTGTGTGCAAGACCACCTTTGTTACGTAATGTGGAGAAATACAAGGTAAGTTTAGTTGATTGGGTCACAAGATGTTATGAGATGAAAGAGCTTCATCAAACGGTGGATCCATTTCTGAAGGGAACTATGAGCAATGAATGTTTGAAATCTTATGGTGAATTAGCATTGAGTTGTTTGCATGAGAATGGGAATCAACGGCCATCGATGCATGATGTGGTTGGGGGATTAGAATTTGTGTTGAATTTGGTGGAAAGTGAAGAAGATATTATTAATAAATTTTCTGGTACACAACAAAATGAGAAGAATGATGAAAAACCATTGTTACCCTTATCATTAGAGTTTATGGGTGATGAAGGGAGTGGTGTGTGTTTCACTAATAGTGATGAATCAGGGTCTACCAAATTGACCAATGTCTCATTAAATAGTGAAGAACAAGCTTTTTGTGCTTTGGTGTTTTCTGAGATTGGGAATCCAAATGCACGATAG 2679 0.3722 MVSFRQNNVHCTNPSSIINLFFFFFFLLLPYSFLLQPLFTMQVSSYNPIDDFAVNCGSIEDITFQNRTWVGDKNSILFAFSEPQNEKPSFIAKPIDLSSISSVPLFDTARFSNSEFTYSFHVSDGPKFIRFHFYPNSYSNTNSSFESYNSLFSVKVDNFTLLKDFNASLWLPKIGEKTFFLEYCINVGTDQNTLNLTFFPSTNSYAFINGIEVVSMPPFLYYTNVSVDLGFPLVGHGSSYHLENNKALETRYRINVGNTGIQPSEDTGMFRNWDSDINYILKQYNNSVSSGFGLQLNYKGYPDYIAPANVYLTARNYGKNPTENYNVTWNFEVDTEFLYMVRLHFCEFVKNITKVGDRVFQIFIDDTLVEGNADLMEWSGGNRLVPIHKDYALLMLNKTEKLKKHTLSIKLQRVLSGYSDVILNGIEIFKISDGNSNLAGPNPDPVSSPPQILQPLNKTSKNITKRKVVIIAVVVVSCLVLVSLLGSIIIFMRRKRGIDENEEKSSWKSKNEGSTLPSHLCRYFTIGEIRASTHNFDEVFIIGIGGFGNVYKGYIDGATPVAIKRLKPGSQQGENEFMNEIEMLSQLRHLHLVSLIGYCNENSEMILVYDFMHRGTLHDYLYNTNHQPLPWKQRLNILLGSARGLHYLHSGAKHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPSDISMTHVSTVVKGSIGYFDPEYYKRQRLTLKSDVYSFGVVLLEVLCARPPLLRNVEKYKVSLVDWVTRCYEMKELHQTVDPFLKGTMSNECLKSYGELALSCLHENGNQRPSMHDVVGGLEFVLNLVESEEDIINKFSGTQQNEKNDEKPLLPLSLEFMGDEGSGVCFTNSDESGSTKLTNVSLNSEEQAFCALVFSEIGNPNAR 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1580 892 SUPERFAMILY Protein kinase-like (PK-like) 513 809 IPR011009 -
Lal6g1580 892 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 44 827 - -
Lal6g1580 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Lal6g1580 892 Gene3D Transferase(Phosphotransferase) domain 1 612 832 - -
Lal6g1580 892 Gene3D Phosphorylase Kinase; domain 1 497 611 - -
Lal6g1580 892 ProSiteProfiles Protein kinase domain profile. 536 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1580 892 SMART serkin_6 536 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1580 892 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Lal6g1580 892 Gene3D - 52 216 - -
Lal6g1580 892 Gene3D - 247 432 - -
Lal6g1580 892 CDD STKc_IRAK 542 804 - -
Lal6g1580 892 Pfam Malectin-like domain 54 431 IPR024788 -
Lal6g1580 892 PANTHER OS07G0166700 PROTEIN 44 827 IPR045272 GO:0004714|GO:0006468
Lal6g1580 892 Pfam Protein tyrosine and serine/threonine kinase 542 804 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1580 Lal-Chr6 18255747 18260166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1580 41 892 Receptor kinase-like Gene Family AT3G51550 44.481 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal6g1580 Malectin_like 7.2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1580 - - aprc:113862548 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1580 6 18255747 18260166 Lal6g1580 6 18255747 18260166 ECH