Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1570 ATGTTTTCTTCTTCAACTTCAGTTCTCAAAAAATGGTGTTTCTTTCAGAAACCCATAACCCCACTTCGTTTTCTTCAACTATTATCTCTCTTTTGTGTCTTACTCTCTCCTCAAAACGACGTCGTTTTCGCCGATTCAGATAAGTCTGTGCTCCTTCAGTTCAAGAACTCAGTCTCTGATCCGTCAGGTCTTCTCTTGACCTGGAACCCAACTGACGGTTCGGACCACTGTTCCTGGTCAGGCGTCCTCTGCGACTCGAGTTCTCGAGTCGTCGCAATTAACATTACTGGCAGTGAAGGTAACCGGAAAAATCTTAATTCTTGTTCCAATTATGATTACTTTCCGATTTTCGGGTTCGGAATTAGAAGAAATTGTGAAGGGAATGGTGGGGCATTGTTTGGCGAGATTTCTCCTTTGATAACCGAGCTTACTGAGCTTAAGGTTCTTTCAATTCCGTTCAACCGTTTGGAAGGTTTGGTTCCTGATGGAATTTGGGGTATGGAAAAGTTGGAGGTTATTGATCTTGAAGGAAACCTTTTAAGTGGTTGTCTCCCAGTTAATTTTCGCGGGTTGAGTAATCTTAGGGTTCTTAACCTTGGGTTTAATAGAATTGCTGGGGTGATACCGGCTTCGCTTTCGAGAATTGCGAGTTTGGAGGTTTTGAATTTGGCTTCGAATAGGATTAATGGGACTATTCCTGGTTTTGTTGGTAGGTTAAGAAGGGTGTATCTGTCTTTCAATCTGATTGGTGGGAGTATTCCGGGAGAGATCGGGGAGAATTGTGGGAAGCTGGAACATCTGGATTTGGCAGGTAATTTTTTAGGTCAGGGGATACCGGGAAGCTTGGGGAATTGTAGTGAACTAAGGACGCTTTCGCTTTATTCGAATTTATTGGAAGATGTTATTCCTGCTGCGTTTGGTAAACTTAAGAAGCTTGAGGTGTTGGATGTTTCGAGGAATACTCTTTCTGGTTCGCTGCCTCGTGAGCTTGGGAATTGTTTGGAGTTGTCTGTCCTTGTTCTATCAAATCTTTTCAATCCGGTTTTGGATGTCAATGGTGCGGCAAGGGAGTCTTCGGTGGAGCAGCCGGTTTCCTTAAATGATGAATATAATTTCTTTGAAGGTCCAATACCTGAGGAAATTACAAGCCTTCCAAACTTGAGAGTATTATGGGCTCCGAGGGCGAATCTGGAAGGCAGTTTTCCGAGCAATTGGGGCGCTTGTTATAAGTTAGAGATGCTCAACTTAGCCGAGAATGCTTTCACTGGGGATTTTCCTAATCAGCTAGCTCACTGCAAGATGCTCCGTTTTCTTGATTTACACTCGAGCAACCTTACTGGTAAGCTTGCTGAAGATCTTTCTGTTCCCTGCATGACTGTTTTTGATGTTAGTGAGAATGTATTATCTGGCACAATTCCAGAATTTTCGGATAACGCTTGTCCTTCACTTCTTTCCTGGAATGGAAATTCGTTTGAAACTGACAACAGGGCCCTGCCATATGTTTCCTTTTTTGCATCAATGGTTCTTAAAGGAACCTTTTTGTCGTCACCTGGTACCGTTTTTCATAACTTTGGTCAAAACAACTTTATTTCCATGGAGTCATTGCCAATAGCACGTGACAGACTGGGGAAGGGGGTTGCTTACACGGTTCTTGTTGGTGAAAACAAGCTGAAGGGGACATTTCCAACTACTTTATTTGAGAAATGTGACGGCTTAAATTCATTGCTTTTAAATGTCAGTTATAATGGGATATCTGGTCCTATTCCTTCCGAGTTTGGTGGAATGTGCAGATCGTTAAAGTTCATCGATGTATCTGGAAATCTGATTACAGGGCCAATTCCCTTTGGTTTTGGAGACTTGGTGTCTCTTGTTTCTCTGAACCTCAGTTGGAACCATTTACATGGTCAGATTCCCACAAGCTTTGGCCGGATGAAGAATTTGAAGTTTCTCTCTCTCGCTGGCAATAACTTAAATGGCTCGATTCCTACCATCCTTGAGCAGTTATACTCTTTAGAAGTCTTGGACCTATCTTCGAACAGTCTTACTGGTGAAATTCCAAAAGGTATCGAGAGTCTGAGAAATCTGACTGGTGTTTTACTAGATAACAACAAACTTTCAGGACAGGTTCCTGCTGGTTTGGCAAATGTCACTACACTCTCGGCATTTAATGTGTCATTCAATAACCTATCCGGATCATTGCCGTTACATAGTAATTTAATAAACTGCAGTAATGCTGTTGGGAATCCGTTTTTACACTCTTGCCGCGGATATTCTCTAACTGCGCCTTCAGAAAATCAGCAAGGGCTAACTGAAGATCCTAATTCTTATACTGCTGCGCCACCAGAAGCTACTGGTCGCAAGAGTGGGAATGTTTTCAATTCCATTGAGATTGCTTCTATAGCTTCTGCATCAGCCATTGTTTCTGTTCTCCTGGCTCTAATTGTCCTTTTCATTTACACACGGAAGTGGAACCAGAGGTCCCGGGTTACTGGGTCTACCCGAAAAGAAGTTACAATGTTCACTGATATTGGGGCTCCATTGACATTTGAAAATGTTGTCCGTGCCACTGGAAATTTCAACGCAGGTAACTGCATTGGGAATGGGGGTTTTGGAGCAACCTATAAGGCAGAGATATCACCAGGAAACTTGGTGGCGATAAAACGTCTGGCAGTTGGACGGTTCCAAGGTTTTCAACAATTCCATGCAGAGATTCAGACCCTTGGAAGGCTGCGTCATCAAAATCTTGTCACTTTGATTGGTTATCATGCTAGTGAGATGGAGATGTTTCTCATATACAACTATTTGCCAGGTGGTAATCTCGAAAAGTTTATCCAGGAGAGGTCCTCAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCGTTGGACATAGCCCGTGCACTTGCATACCTGCATGATCAGTGTGTACCACGCGTCCTTCATCGTGATGTCAAGCCTAGTAATATCTTGTTGGATGATGATTTCAATGCTTATCTATCTGACTTTGGATTGGCTAGACTTCTGGGTACTTCAGAAACCCATGCTACCACTGGCGTAGCAGGAACGTTCGGCTATGTTGCTCCTGAATATGCCATGACTTGCCGTGTTTCCGATAAGGCTGATGTGTATAGTTATGGTGTGGTGCTTCTGGAGTTACTCTCAGATAAGAAGGCATTGGATCCTTCATTTTCTGCATATGGGAATGGTTTTAACATAGTTCAATGGACAGGCATGCTACTGCGTCAAGGCCGGGCTAAGGAGTTCTTCACTGCTGGCTTATGGGATTCCGGACCCGAAGATGATTTGATTGAGGTCCTACACTTAGCTGTTGTGTGCACTGTTGAATCTCTCTCTACCAGACCTTCAATGAAACATGTCGTACGGCGGCTTAAACAACTTCAACCGGCATCATGCTAG 3417 0.434 MFSSSTSVLKKWCFFQKPITPLRFLQLLSLFCVLLSPQNDVVFADSDKSVLLQFKNSVSDPSGLLLTWNPTDGSDHCSWSGVLCDSSSRVVAINITGSEGNRKNLNSCSNYDYFPIFGFGIRRNCEGNGGALFGEISPLITELTELKVLSIPFNRLEGLVPDGIWGMEKLEVIDLEGNLLSGCLPVNFRGLSNLRVLNLGFNRIAGVIPASLSRIASLEVLNLASNRINGTIPGFVGRLRRVYLSFNLIGGSIPGEIGENCGKLEHLDLAGNFLGQGIPGSLGNCSELRTLSLYSNLLEDVIPAAFGKLKKLEVLDVSRNTLSGSLPRELGNCLELSVLVLSNLFNPVLDVNGAARESSVEQPVSLNDEYNFFEGPIPEEITSLPNLRVLWAPRANLEGSFPSNWGACYKLEMLNLAENAFTGDFPNQLAHCKMLRFLDLHSSNLTGKLAEDLSVPCMTVFDVSENVLSGTIPEFSDNACPSLLSWNGNSFETDNRALPYVSFFASMVLKGTFLSSPGTVFHNFGQNNFISMESLPIARDRLGKGVAYTVLVGENKLKGTFPTTLFEKCDGLNSLLLNVSYNGISGPIPSEFGGMCRSLKFIDVSGNLITGPIPFGFGDLVSLVSLNLSWNHLHGQIPTSFGRMKNLKFLSLAGNNLNGSIPTILEQLYSLEVLDLSSNSLTGEIPKGIESLRNLTGVLLDNNKLSGQVPAGLANVTTLSAFNVSFNNLSGSLPLHSNLINCSNAVGNPFLHSCRGYSLTAPSENQQGLTEDPNSYTAAPPEATGRKSGNVFNSIEIASIASASAIVSVLLALIVLFIYTRKWNQRSRVTGSTRKEVTMFTDIGAPLTFENVVRATGNFNAGNCIGNGGFGATYKAEISPGNLVAIKRLAVGRFQGFQQFHAEIQTLGRLRHQNLVTLIGYHASEMEMFLIYNYLPGGNLEKFIQERSSRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSAYGNGFNIVQWTGMLLRQGRAKEFFTAGLWDSGPEDDLIEVLHLAVVCTVESLSTRPSMKHVVRRLKQLQPASC 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1570 1138 Gene3D Phosphorylase Kinase; domain 1 820 934 - -
Lal6g1570 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 979 991 IPR008271 GO:0004672|GO:0006468
Lal6g1570 1138 Gene3D Ribonuclease Inhibitor 357 532 IPR032675 -
Lal6g1570 1138 Gene3D Ribonuclease Inhibitor 238 346 IPR032675 -
Lal6g1570 1138 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Lal6g1570 1138 Gene3D Ribonuclease Inhibitor 546 767 IPR032675 -
Lal6g1570 1138 CDD STKc_IRAK 865 1133 - -
Lal6g1570 1138 SUPERFAMILY Protein kinase-like (PK-like) 840 1130 IPR011009 -
Lal6g1570 1138 Gene3D Ribonuclease Inhibitor 44 237 IPR032675 -
Lal6g1570 1138 SUPERFAMILY RNI-like 368 736 - -
Lal6g1570 1138 ProSitePatterns Protein kinases ATP-binding region signature. 865 887 IPR017441 GO:0005524
Lal6g1570 1138 SMART serkin_6 859 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1570 1138 ProSiteProfiles Protein kinase domain profile. 859 1138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1570 1138 MobiDBLite consensus disorder prediction 762 783 - -
Lal6g1570 1138 Pfam Leucine Rich Repeat 263 285 IPR001611 GO:0005515
Lal6g1570 1138 Pfam Leucine Rich Repeat 670 692 IPR001611 GO:0005515
Lal6g1570 1138 Gene3D Transferase(Phosphotransferase) domain 1 935 1136 - -
Lal6g1570 1138 Pfam Leucine rich repeat 187 228 IPR001611 GO:0005515
Lal6g1570 1138 Pfam Leucine rich repeat 287 343 IPR001611 GO:0005515
Lal6g1570 1138 SMART LRR_typ_2 644 667 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 620 643 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 261 285 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 191 214 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 143 166 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 309 333 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 286 308 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 167 190 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 668 692 IPR003591 -
Lal6g1570 1138 SMART LRR_typ_2 236 260 IPR003591 -
Lal6g1570 1138 Pfam Protein kinase domain 862 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1570 1138 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 25 1136 - -
Lal6g1570 1138 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 25 1136 - -
Lal6g1570 1138 SUPERFAMILY L domain-like 46 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1570 Lal-Chr6 18065433 18068849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1570 41 1138 Receptor kinase-like Gene Family AT3G02130 62.946 0.0 1328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Lal6g1570 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1570 - - gmx:100803058 1716.05