Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1562 ATGGATATTAAGGATAATAATCCTATGATTCCTGAGTTAGAAAGAGAGGAGAATTTAATTGCTGCAGCAAGACATATTATTAAGGCATTAGGGTCAAATAATAACCTTACTAGTGATGCCAAGAAAATTCTTGCAGATCTTGGTTCTCAATTATCCTCCATCAGCATCTTTAATGATAAGGAAGAGGAAGAGGATCTTAATGAGATCGAAAATCGGTTCGGAGTAATTCATGAAAAAATAATGAAATGGGATGAAGATCAGTCTATGATCTGGGATTTGGGACCTGAAGAAGCATCTGATTATATGAATGCTGCTAACGAGGCCCGAGAATTGATCGAAAAAATGGAGAATTTGCATTTGAATAAGGAGGATAAAGAGCATGAGTTATTGCTGAGGGCTTATAGTGTTCTTCAATCAGCTATGTCAAGGCTTGAAGAAGAGTTTAGGAATTTGCTTATCCAGAATAGACAACCTTTTGAACCTGAATATGTGTCTTTTCGGTCTATTGAAGAAGATGCTATTGATGGGAATTCGATGGTTTCTTTTGGTGATGAATCGATTGAGGAATCGCTTCGAAGAGACAGTGTTAGCAGGGCTTCGGAAGAGCTTATCATTGATTTAGTGCATCCGGATGTGTTACCCGATCTAAGGTGTATTGCAAACTTATTGTTTGCTTGTAATTATGTCCAAGAATGTTCACATGCTTATACTATTGTCCGAAGGGATGCTTTAGACGAGTGTCTCTTCATTCTTGAAATGGAAAGGTTGAGTATCGAGGATGTCTTGAGGATGGAGTGGGGTGCTTTGAATTCGAAAGTCAAAAGATGGATTTGGGCTGTAAAGATATTTGTTAGGGTGTATCTTGCAAGTGAGAAATGGCTTAGTGACCAGATTTTCGAGGAGAGTGGACCGGTTAGTATAGCTTGTTTTGTTGATGCGTCCAAGGCTTCGGTATTGCAGATTATGAATTTCGCTGAAGCTATTACTATCGGCCCTCGCCAACCCGAAAAATTGTTTCGAATTCTTGACATGTATGAGGTTCTAGCAGACCTTATGCCAGACATTGATGCCTTGTATTCAGATGAGGTTGGCTCTTATGTTAAAGTTGAATGTCATGAGGTTCTTAACAGATTAGGGAATTGTGTGACGGCAACATTTCTTGAATTCGGAAGTGCCATTGCATCGAATGCATCATCAACCGCTTTCGTTGGTGGTGGGATACACCCTTTGACCAAATATGTTATGAATTATCTTTTGATTCTCACTGACTACAATGAAACACTTAATCTGCTTCTAAAGGACCAAGAAGACGAGGATTCGATTTCGTTGTCACCTGACATGAGCCCAGGTACAGAAGAGGATAGCAAAAGTCGGGGATATCCAGGTAGAGTTTCCTCGATGGCCCTTCACTTCAGATCACTTGCCTCAATCTTGGAATCCAACCTTGAAGACAAGTCCATGTTATATAGAGAGGTTCCCTTGCAGCACTTATTCTTGATGAATAACCTACATTATATGGCTGAAAAGGTTAAGGGTTCTGAGCTTAGGCGCATATATGGAGATGAATGGATTCGAAAGCGCAACTCGAAGTTTCAGCGGCATGCAAGGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAAGGATGATGGAATCCATGTTCCAGGTACAAATTCTATCTCAAAAGGTCTTCTTAAGGAGAAGTTAAGGACCTTCTACCTTGCCTTTGAGGATGTTTACCGGATCCAAACAGCTTGGCATATCCCCGATGTTCAGCTTCGCGAAGACTTGAGGATTTCTACTTCCCTCAATGTAATCCAAGCTTATAGGACATTCGTCGGAAGGCATAATAGTCACATAAGTGACAAATACATTAAGTACACCGCCGATGATTTAGAAAATTACCTTTTCGATTTCTTCGAGGGGATTTCGAAAATGGTTGCAAAATCCTCATAG 1965 0.402 MDIKDNNPMIPELEREENLIAAARHIIKALGSNNNLTSDAKKILADLGSQLSSISIFNDKEEEEDLNEIENRFGVIHEKIMKWDEDQSMIWDLGPEEASDYMNAANEARELIEKMENLHLNKEDKEHELLLRAYSVLQSAMSRLEEEFRNLLIQNRQPFEPEYVSFRSIEEDAIDGNSMVSFGDESIEESLRRDSVSRASEELIIDLVHPDVLPDLRCIANLLFACNYVQECSHAYTIVRRDALDECLFILEMERLSIEDVLRMEWGALNSKVKRWIWAVKIFVRVYLASEKWLSDQIFEESGPVSIACFVDASKASVLQIMNFAEAITIGPRQPEKLFRILDMYEVLADLMPDIDALYSDEVGSYVKVECHEVLNRLGNCVTATFLEFGSAIASNASSTAFVGGGIHPLTKYVMNYLLILTDYNETLNLLLKDQEDEDSISLSPDMSPGTEEDSKSRGYPGRVSSMALHFRSLASILESNLEDKSMLYREVPLQHLFLMNNLHYMAEKVKGSELRRIYGDEWIRKRNSKFQRHARKYERASWSSILNLLKDDGIHVPGTNSISKGLLKEKLRTFYLAFEDVYRIQTAWHIPDVQLREDLRISTSLNVIQAYRTFVGRHNSHISDKYIKYTADDLENYLFDFFEGISKMVAKSS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1562 654 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 23 648 - -
Lal6g1562 654 Coils Coil 98 154 - -
Lal6g1562 654 Gene3D Exocyst complex component Exo70 81 652 - -
Lal6g1562 654 Pfam Exo70 exocyst complex subunit 274 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal6g1562 654 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 648 IPR004140 GO:0000145|GO:0006887
Lal6g1562 654 MobiDBLite consensus disorder prediction 440 460 - -
Lal6g1562 654 SUPERFAMILY Cullin repeat-like 86 644 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1562 Lal-Chr6 17982286 17984250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1562 12 653 EXO70 exocyst subunit family AT3G29400 47.504 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1562 K07195 - gmx:100799102 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1562 6 17982286 17984250 Lal6g1562 6 17982286 17984250 ECH
Lal22g1265 22 15008703 15010721 Lal6g1562 6 17982286 17984250 LSH