Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1561 ATGGGTGAAATACCAAGTCAAATAAAAGCATGGACCTACTCTGAGTACGGAAAATCAAGTGAAGTTCTAAAGTTTGATGAAGCTGTCCCTACACCAGTGGTGAAAGATGATCAGGTTCTCATCAAAGTCATTGCTGCATCCATTAATCCCATTGATTATAAGAGATTGGCTGGTTTCTTTAAGGACTCTGATTCCCCTTTACCTACTGCTCCAGGCTATGATGTTGCTGGTGTGGTTGTGAAAGTGGGAAGTGAGGTGAAGAAATTTAAGGTTGGTGATGAAGTTTATGGTGATATCAATAGAGAAGCTTTGATCCATCCAAAGGTCATTGGTTCTTTGGCAGAGTATACTACTGCTGAAGAGAATCTATTGTCTCACAAGCCACATAATTTGACCTTCGCCGAGGCCGCGAGCCTTCCTTTAACAATTGAAACTGCTTTTGAAGGTCTTGAAAGAGCTGGGTTTTCTGCTGCCAAATCTATCCTTGTTTTGGGAGGTGCTGGTGGTGTTGGAACCCATGTTATCCAGCTTGCCAAGCATGTTTATGGTGCATCCAAAGTAGCAGCAACTTCTAGCACTGGGAAACTGGAATTGTTGAGGAATTTGGGAGCTGACTTGGCTATAGATTATACAGTCGAGAACTTCGAAGACTTGCCCGAAAAGTTCGACGTTGTGTACGATACAGTAGGTATAACAGATAAGGCATTTAAGGCTGTGAAAGAGGGAGGCAAAGTTGTTACAATAGTACCCCCTGGATTTGAAAATGCTATATTTTTTATACTTACTTCTGATGGAGCTATCTTAGACAAACTGAAATCATACCTCGAGAGTGGCAAGGTGAAGCCGGTGCTCGATCCGAAGAGTCCATTTCCATTTTCTCAGACTGTTGAAGCATTTTCGTATCTGGAAACAGGCAGAGTCACTGGAAAAGTAGTGATCCATCCTATTCAGTCAGCATGA 960 0.424 MGEIPSQIKAWTYSEYGKSSEVLKFDEAVPTPVVKDDQVLIKVIAASINPIDYKRLAGFFKDSDSPLPTAPGYDVAGVVVKVGSEVKKFKVGDEVYGDINREALIHPKVIGSLAEYTTAEENLLSHKPHNLTFAEAASLPLTIETAFEGLERAGFSAAKSILVLGGAGGVGTHVIQLAKHVYGASKVAATSSTGKLELLRNLGADLAIDYTVENFEDLPEKFDVVYDTVGITDKAFKAVKEGGKVVTIVPPGFENAIFFILTSDGAILDKLKSYLESGKVKPVLDPKSPFPFSQTVEAFSYLETGRVTGKVVIHPIQSA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1561 319 Pfam Zinc-binding dehydrogenase 202 313 - -
Lal6g1561 319 Pfam Alcohol dehydrogenase GroES-like domain 37 99 IPR013154 -
Lal6g1561 319 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 3 316 - -
Lal6g1561 319 Gene3D - 15 313 - -
Lal6g1561 319 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 316 IPR044626 GO:0016628
Lal6g1561 319 SMART PKS_ER_names_mod 18 313 IPR020843 GO:0016491
Lal6g1561 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 283 IPR036291 -
Lal6g1561 319 CDD MDR_like_2 9 313 - -
Lal6g1561 319 Gene3D - 150 264 - -
Lal6g1561 319 SUPERFAMILY GroES-like 5 165 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1561 Lal-Chr6 17968084 17969935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1561 37 248 Monolignol Biosynthesis Gene Families AT3G19450 24.898 4.62e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1561 K18980 - gmx:100817947 492.656