Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1527 ATGTCCACTCCCAACGCCGATTCCGCCACCGCTCCTTCACGTCCCACGATTACTCTCCCTCCTCGTCCCTCCGCCGAGGCCTTCTTCTCCGCCGATGGCGTCAGCCCCGGTCCCATGACCCTAGTCTCCAACTTCTTCTCCGATAGCGTCTACTCCGACACCGACTACCGCTCCTTCTCACAGCTCCTCGCCGGAGCTATGGCCTCTCCACTTGCGTTCGGCGCAGCTCGGCCACCTCTATTCCCTGCCACCGACAATTCCGGCGAAGAAGACGGTGGGACCCATAAGAGTTTAGGGTTCAAGCAAAGTAGACCAATGAATTTGGTAGTTGCTCGTTCTCCAATGTTCACAATCCCTCCAGGGTTGAGCCCTTCTGGGTTTCTCAACTCGCCTGGTTTCTTTTCGCCACATAGCCCATTTGGAATGTCCCACCAACAGGCATTAGCACAGGTTACAGCTCAAGCTGTACTAGCACAATCTCATATGCACATGCAAGCTGATTATCATCCGTCTGCTGCAATAACTGCTTCCACCGAGCCATCGGTCGAGCAGCCATCCTTTCTTCTAAATGAACCTTCAGAGCAGCAAGTGTTACAATCTGTATCAGAACCTATGAATGCTCAACCAGGAACATCAGAGCTTACTCAAACTGATAAGAAATATCAACCATCTTCCCTGGCTGTTGACAAACCTGCCGATGATGGCTATAACTGGCGCAAGTATGGGCAGAAGCATGTTAAGGGCAGTGAGTATCCACGGAGCTACTACAAGTGTACCCATCTGAATTGCCCTGTGAAGAAAAAAGTTGAGCGTGCACCTGATGGTCGCATAACTGAGATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGGGAAATAGGCGTGTAAAAGATAATAGTGATTCAAATGTAAATGCAAGTGTTCAACCCAATACTAATTCAAACTCTCAAGGTTGGGTAGGAAGTTCAACCAAGTTTGAAGAAGGGATGCCTGATTGTTCAGTGCCTGAACATGACCCGACGTTCAATCCAGGAGCTTCCAGGCAACTACCTGGATCAACTGCAAGCGAGGAAGCAGGTGATGTAGAAAATAGGGAAGTGGGAGATGATAAGGAGCCAAACCTGAAGAGAAAGCAAGTCTCGCCGAACACTGATATTGCGGTTTCTGAAGCACCTCTTTCTCAGAAGACTGTTACAGAGTCCAAAATCATTGTACAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGCTACAGATGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAAAGGTTATTTGTCTAAGAGCATCTCCATAAGGGAGTTGCACATAACCTTGTGGAGCAACTATCTAGTAGTTGCAAAAATAACTGCCCTTGGAGGGAAACCTACCTCCACCACCATGTCAGCCTCTGAAACCATTGGATCCACGAAAACCACCCCTGAAATCACCACGAAAGCTGGTAGAACCACCAGAGCCACGAAAAGGAGCCCTAAATCCCTAAGGTCTAGTGTGAAATTGCGAAGAAGGTGCAACAGGCCTTCCAGAGGAGATATAATCAAAGGAATGCATAGGAGTTATTACAAATGTACTAGTGCAGGATGCAACGTGCGTAAACATGTCGAGAGAGCTTCAACTGACCCCAAAGCTGTTGTAACTACATATGAGGGGAAACATAACCATGATGTGCCTGCTGCTAGAAACAGCAGCCACAACACAACAAGTAGCAATTCAATGGCATTAAAACAGCATAATGTTGTGCCTGAGAAGCATCCTTTGCTTAATGATATGGATTTTGGAAGTAATGACCAAAAACCGGTACATTTACGCTTAAAAGAAGAAAAACTTATAGTATAA 1878 0.4686 MSTPNADSATAPSRPTITLPPRPSAEAFFSADGVSPGPMTLVSNFFSDSVYSDTDYRSFSQLLAGAMASPLAFGAARPPLFPATDNSGEEDGGTHKSLGFKQSRPMNLVVARSPMFTIPPGLSPSGFLNSPGFFSPHSPFGMSHQQALAQVTAQAVLAQSHMHMQADYHPSAAITASTEPSVEQPSFLLNEPSEQQVLQSVSEPMNAQPGTSELTQTDKKYQPSSLAVDKPADDGYNWRKYGQKHVKGSEYPRSYYKCTHLNCPVKKKVERAPDGRITEIIYKGQHNHEKPQGNRRVKDNSDSNVNASVQPNTNSNSQGWVGSSTKFEEGMPDCSVPEHDPTFNPGASRQLPGSTASEEAGDVENREVGDDKEPNLKRKQVSPNTDIAVSEAPLSQKTVTESKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRKGYLSKSISIRELHITLWSNYLVVAKITALGGKPTSTTMSASETIGSTKTTPEITTKAGRTTRATKRSPKSLRSSVKLRRRCNRPSRGDIIKGMHRSYYKCTSAGCNVRKHVERASTDPKAVVTTYEGKHNHDVPAARNSSHNTTSSNSMALKQHNVVPEKHPLLNDMDFGSNDQKPVHLRLKEEKLIV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1527 625 MobiDBLite consensus disorder prediction 202 236 - -
Lal6g1527 625 ProSiteProfiles WRKY domain profile. 410 571 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 SMART WRKY_cls 415 570 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 Pfam WRKY DNA -binding domain 530 568 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 Pfam WRKY DNA -binding domain 416 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 MobiDBLite consensus disorder prediction 1 15 - -
Lal6g1527 625 SUPERFAMILY WRKY DNA-binding domain 530 571 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 MobiDBLite consensus disorder prediction 281 297 - -
Lal6g1527 625 MobiDBLite consensus disorder prediction 202 223 - -
Lal6g1527 625 MobiDBLite consensus disorder prediction 298 324 - -
Lal6g1527 625 MobiDBLite consensus disorder prediction 1 24 - -
Lal6g1527 625 MobiDBLite consensus disorder prediction 469 510 - -
Lal6g1527 625 MobiDBLite consensus disorder prediction 360 379 - -
Lal6g1527 625 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 527 624 IPR044810 GO:0003700
Lal6g1527 625 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 439 IPR044810 GO:0003700
Lal6g1527 625 SUPERFAMILY WRKY DNA-binding domain 407 439 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 MobiDBLite consensus disorder prediction 469 498 - -
Lal6g1527 625 MobiDBLite consensus disorder prediction 281 386 - -
Lal6g1527 625 Gene3D WRKY domain 402 447 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 Gene3D WRKY domain 526 564 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 Gene3D WRKY domain 220 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 SUPERFAMILY WRKY DNA-binding domain 230 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g1527 625 PANTHER WRKY PROTEIN 10 439 - -
Lal6g1527 625 PANTHER WRKY PROTEIN 527 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1527 Lal-Chr6 17279440 17288962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1527 526 623 WRKY Transcription Factor Family AT2G03340 57.426 1.46e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal6g1527 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1527 - - aip:107635357 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1230 22 14480320 14491666 Lal6g1527 6 17279440 17288962 LSH