Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1505 ATGGGAGTCCACGGTCTCTGGGAATTACTCGCCCCCGTCGGTCGCCGCGTCTCCGTCGAGTCCCTCGCTGGAAAAACACTCGCCGTCGATGCTAGCATATGGATGGTGCAATTTCTAAAGGCAATGCGTGACGAGAAGGGAGAAATGATTCGCAATGCTCACTTACTCGGTTTTTTCCGTCGAATTTGCAAGCTTCTTTTCCTACGGATCAAGCCGGTATTTATCTTTGATGGAGGAACCCCCGCCCTTAAGCGCCGCACAGTGATTGCACGCCGCAGGCAGCGCGAAAATGCTCAGGCCAAAGTCCGAAAAACTGCTGAGAAATTGCTTCTCAATCATTTAAAGGCATTGAGGTTGAAAGAACTGGCTGATGATATTAAGAACCAGAAGCTAAAGCAGAAGAATGATACCAAGAGTCAGAAAAAATCTGATCAGATGGACTGCATTGATAATGATTTAGGAAAAAGAAACATGAAAGAGCTAGATGAGATGTCTGCATCTAAGGAGGAGAGGAATTCATCGCAAACAATAATATCGAGAATTTGCAACCAGGAGAAGCTTGATGAAATGCTGGCGGCATCTATGGCTGCAGAGGAAAATGGAATACTATCCAGAAATAAAGCATCATCATCTTATGTAGCTAATCCTTCAGAGGAAGAATGTGATGCAAATGAAGAAATGATACTGCTTAAAGGAAAGAAAACAGGATTGATGAAGGATGTTGAAAACCAGAAGCAACATAAGGTCAATGGTAAGGACAAGGGTAAGGGGATACTGTCCTGTGAAACTGACGTGGTTGGCTGTAGCCCCAGATGTGACAAATTGACATCTAAAAGTGACAATCAAGACAAACTTGATGAAATGTTAGCTGCATCTATTGCTGTAGAGGAGAATACAAGGTTAGTAAATAATACATCAGTTTCTCTTGAGCCTTCTACCATTGAGGAAGAGGATGGTGGCTACAATGAAGATGAAGAGATGATACTGCCACCAATGCATGGTGAAATTGATCCCCTTGTTCTAGCCTCTTTGCCTCCATCAATGCAATTGGACCTCCTTGTTCAGATGAGAGAGCGGTTGATTGCAGAGAACAGACATAAGTATCAGAAAGTCAAGAAGGATCCTGCAAAATTTTCAGAGCTACAAATACAAGCTTACCTTAAAACTGTTACTTTCCGACGGGAGATAGATGAAGTACAGAAAGCTGCTGCTGGGAGAGGTGTAGGAGGTGTACAGACTTCGCGGATCGCTTCTGAGGCCAACAGAGAATATATATTCTCATCATCTTTTATGGGTGACAAACAAGAGCTTACCTCCACCAGATTGGGGAAAATTAAAGATGCACGACCAGAAGCACGTGGAACACACCCGTCACGGAAACTTGTGAATAACATTGAAGTAGTAACAGGCGATGATTATAGTACTTCAAGTGGATTGGCTCACTATGAACCTGATGATCATGTTGATGATAGTATTCAGACATATGTAGATCAGAATGGTCGATTTCGTGTCAGTAGGTCAAGAGCTATGGGGATGTGTATGACCCGTGATATACAAAGGAATTTGGATATGATGAAGGAGATTGAGCAGGAAAGAACATATGTTAATAGGGCTTCAAATAATAACACAGTACTAAATGCTGAGAATAATGCTCCATTTGAAAATTCTGGGAACCGGCTTCCTTGTAAATCACAAGAGATGAATGTTGACTTAGTTAGAGAGAATTTTCAAAATGAGCAGTCCATGTTAGACAGGGATACTACTATAGAGATATCCTTTGAATATGATTGCAAGAGTAAGTTTGTAGATGGCGAGGATGACATATTTGCTAGCTTAGTAGGAAGAAATTCCAGGGAAATCTTTTGTGCTGATGATACTGCAGAAAAAGAACAACGTTCTGATTCTGATTCAGATTGTAATTTGGAAGAAGGAACTATTGAAGGTAAGAATACCAATTTTCGTGGAGAAAATAAGGTGGAATTGATCTCTTCTACTGCAGATGGGGATAATAATGATGAGAGCGAGGTAGAATGGGAGGATGGAGATTGTGATGGTGCTGAAAGCACCTTACTGTTTCCATTTGAATCAGAAAAGGCAGCATCTCGAGGGTGCCTGGAGGAGGAGTCGGATTTGCAGGAGGCAATAAAGAGAAGCCTTGATAGTATAGGGGATGGGGAACTTAAGCACATGTCATCTGTAGATGAGCATTCAACTGCTGATGAGAATAAATTGGGTCATGGAGAAGACCATGACGTTAATACAGGTGATTCTACTTTGCCTAGAGAAGACAATACTGAACAAAATCAATTACCTGAAATTGTAGATGGAGATGAAAAGCATGATTTTATGGATAGAAATAACCCACATACTCTGAATTTCCCTGGAGGTCAGTCAAAGTCATCACTGTCATTTAATTTCAAGAACAAGGAATTGTTGATTGATAAACCTTGCATACTGGATACACGCTCTCGTCCTGAAGATTCAACTTCAGATGCAAATGCAACAATGGAGGATGAGATCAATATGGTTGCAGAGCAGTTATCAGATAAATGTGATGAAGATGCTAAAGTGCCTTTCTATTGCAACAATTCATCCAATGTCACTAAGGAGGAGAAAAAGACCTATATTAATGAATCTGTAACATTCAGTAAATTTAATGACAATACCAAGCCTGTTATTCCTTTGACGGAGTCATCGTTGAAAGAATCAACAGAAGACCGCAACATGGAGCCAAAGTTGCTTGCAGTGGACAATGATAGAAGTTTCTACGTGGAAGGGAGCAATAACCTTGCCAAAGACGCAGTGAATACCTCAGGAGATTTACCTGCCAATGTAGCTGAGGTTAGATTGGAGGAAGAAATGCGAGTTCTCGATCAAGAATATATCGACCTACAAAATGAGCAGAGAAACCTTGAACGTAATGCAGAATCTGTAAACAGTGAATTATTCGCAGAATGTCAGGAACTACTTCAAATGTTTGGCTTGCCATATATTATTGCTCCGATGGAAGCTGAAGCGCAGTGTGCTTATTTGGAACTCGCGAAACTGGTTGATGGTGTTGTGACTGATGACTCTGATGTCCTTTTATTTGGGGCTCGTAGTGTTTACAAGAATATATTTGATGACCGCAAATATGTAGAGACATACTTCATGAAGGACATTGAGAAGGAGCTTGGATTGACCAGAGAAAAAATAGTACGCATGGCATTATTGCTTGGGAGTGATTATACTGAAGGTGTAAGTGGGATTGGCATTGTTAATGCCATTGAGGTTGTAAATGCATTCCCTGAGGAAGATGGCCTCCTTAAATTCCGGCAGTGGGTGGAGTCACCAGATCCTACCATACTTGGAAGGTTGGATGCAAAAACTGGACCCAATACCAAAAAGAGAGGGTCGAAAGTTGAAGAGAAGATCAATGTCTCGAAAAGCAATATTGAAGAGTCTGCATTAGACCCCCATGCTCCGGAGCAAAAGGAGTCTCTGGATTGCATACAAGAAATAAAACAAACTTTCTTCAATAAGCATAGAAATATTAGCAAGAATTGGCATATTCCTTCTTCTTTTCCAAGTGAAACAGTTATGTCTACTTACTATTCTCCCCAAGTTGACAAGTCAATCGAGCCTTTCACGTGGGGAAAGCCAGATCATCTTGTTCTTTGCAAATTGTGCTGGGAAAAATTTGGATGGGCTAGACAAAAAGCAGATGAATTGCTATTACCTGTTTTAAAGGAATATAACAAACATGAGACTCAACTTCGGTTGGAAGCATTTTACAGCTTCAATGAAAGATTTGCAAAAATTCGCAGCAAGAGAATTAAGAAAGCTGTAAAAGGTATTAGTGGTAAGATATCTGCAGATTTGACAGATAATTCTTTGGACGATTTAAACAAAACTGGGAAGAATGAGATACGAAGTTCTGTTGAACCTGGGGATTACAAATTGGATGATTCAAAGGAAACAGGGGAGGGACTTGAATGTAGGAAGAAATCTAATACTAAACAGTCAAAGAAAAGAAAGAACAACGGGGATACTTTTGGCAAGGCACATTCAAGAACAAAGAAAACCAGTGATGGTCCTTCAGCTCCTGGTACATCTGAGGTGGAGAATTTACATACATGTATGCAGACAGAAGAAAAGCAATATGATGTTAAGGAATTGATTAGAAATAAAAGTGGTAGAGGCAGAGGAAGAGGTAGAAGCTTGGGAGTAAAAAGAGGAAGGGAAAAGGAATGTCTTAATTTTCAGTCAGGTGAAACCCCAGCTAGTAGTAGTTACACTGTTGATCATGGCTCAAGAGTGCAGTCTGATTTGTCAAAATTTCCACAAGAAGTGCGAAGGTCAACACGATCTCGGAAACCCGTCAAGTATTCTTTCAATGACCTTGAAGTTGAAGATTCTGATGATGCATTTGATCAGACAAATCAGCCATTCTTGCATGATGAGCCAGCAAAAGAAACCTTATCTGATATTCATGGAGAGGCTGCAACTGACTTCAGCAGAGGAAAAGAAACCAGTGAAGCCAATATTCCTGTAAAGGAGAACTTGCCTAGTGACAATTTTCAGTCAGAAAGTTGTTTTCACACAGATGATAATTCTTCTGATTACTACCTTAAAATCGGAGGTGGGTTCTGTTTGGATGATGATAATACAACTAACAATCATGATGCAATTGATGTCAATACTGCTACAGCTGGTTATACTGCAGAATTTCCATCATATTCTGATTTTTTCGACGAGACTATCCGAAACAAAGATAGTTCAGATGTATTATTTTCTGGCACTGAAAAAGCTGAAATTGAAGTGCAAGAGGGTAATAAAGAGGTAAATGATGACCTTCTAAGTGGTAGTAGTTATGATCATTCTGAAATGGGGGTCTTGAAACCAGAGAATACTCATGAGAACAGTGGAATCTCCATGGGAGCTTTTAGTGCTATACCCTTTTTGAAGAAAAGAAGGATGAACTGA 4965 0.403 MGVHGLWELLAPVGRRVSVESLAGKTLAVDASIWMVQFLKAMRDEKGEMIRNAHLLGFFRRICKLLFLRIKPVFIFDGGTPALKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALRLKELADDIKNQKLKQKNDTKSQKKSDQMDCIDNDLGKRNMKELDEMSASKEERNSSQTIISRICNQEKLDEMLAASMAAEENGILSRNKASSSYVANPSEEECDANEEMILLKGKKTGLMKDVENQKQHKVNGKDKGKGILSCETDVVGCSPRCDKLTSKSDNQDKLDEMLAASIAVEENTRLVNNTSVSLEPSTIEEEDGGYNEDEEMILPPMHGEIDPLVLASLPPSMQLDLLVQMRERLIAENRHKYQKVKKDPAKFSELQIQAYLKTVTFRREIDEVQKAAAGRGVGGVQTSRIASEANREYIFSSSFMGDKQELTSTRLGKIKDARPEARGTHPSRKLVNNIEVVTGDDYSTSSGLAHYEPDDHVDDSIQTYVDQNGRFRVSRSRAMGMCMTRDIQRNLDMMKEIEQERTYVNRASNNNTVLNAENNAPFENSGNRLPCKSQEMNVDLVRENFQNEQSMLDRDTTIEISFEYDCKSKFVDGEDDIFASLVGRNSREIFCADDTAEKEQRSDSDSDCNLEEGTIEGKNTNFRGENKVELISSTADGDNNDESEVEWEDGDCDGAESTLLFPFESEKAASRGCLEEESDLQEAIKRSLDSIGDGELKHMSSVDEHSTADENKLGHGEDHDVNTGDSTLPREDNTEQNQLPEIVDGDEKHDFMDRNNPHTLNFPGGQSKSSLSFNFKNKELLIDKPCILDTRSRPEDSTSDANATMEDEINMVAEQLSDKCDEDAKVPFYCNNSSNVTKEEKKTYINESVTFSKFNDNTKPVIPLTESSLKESTEDRNMEPKLLAVDNDRSFYVEGSNNLAKDAVNTSGDLPANVAEVRLEEEMRVLDQEYIDLQNEQRNLERNAESVNSELFAECQELLQMFGLPYIIAPMEAEAQCAYLELAKLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIEKELGLTREKIVRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLLKFRQWVESPDPTILGRLDAKTGPNTKKRGSKVEEKINVSKSNIEESALDPHAPEQKESLDCIQEIKQTFFNKHRNISKNWHIPSSFPSETVMSTYYSPQVDKSIEPFTWGKPDHLVLCKLCWEKFGWARQKADELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGISGKISADLTDNSLDDLNKTGKNEIRSSVEPGDYKLDDSKETGEGLECRKKSNTKQSKKRKNNGDTFGKAHSRTKKTSDGPSAPGTSEVENLHTCMQTEEKQYDVKELIRNKSGRGRGRGRSLGVKRGREKECLNFQSGETPASSSYTVDHGSRVQSDLSKFPQEVRRSTRSRKPVKYSFNDLEVEDSDDAFDQTNQPFLHDEPAKETLSDIHGEAATDFSRGKETSEANIPVKENLPSDNFQSESCFHTDDNSSDYYLKIGGGFCLDDDNTTNNHDAIDVNTATAGYTAEFPSYSDFFDETIRNKDSSDVLFSGTEKAEIEVQEGNKEVNDDLLSGSSYDHSEMGVLKPENTHENSGISMGAFSAIPFLKKRRMN 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1505 1654 MobiDBLite consensus disorder prediction 1415 1441 - -
Lal6g1505 1654 CDD H3TH_XPG 1063 1204 - -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 670 684 - -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 722 773 - -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 1372 1392 - -
Lal6g1505 1654 SUPERFAMILY PIN domain-like 2 1075 IPR029060 -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 625 643 - -
Lal6g1505 1654 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Lal6g1505 1654 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Lal6g1505 1654 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Lal6g1505 1654 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 224 1364 - -
Lal6g1505 1654 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 1 229 - -
Lal6g1505 1654 Pfam XPG I-region 994 1075 IPR006086 GO:0004518
Lal6g1505 1654 Coils Coil 947 981 - -
Lal6g1505 1654 SMART xpgn3 1 98 IPR006085 GO:0004518
Lal6g1505 1654 MobiDBLite consensus disorder prediction 1290 1451 - -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 130 152 - -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 1355 1371 - -
Lal6g1505 1654 ProSitePatterns XPG protein signature 2. 994 1008 IPR019974 GO:0016788
Lal6g1505 1654 CDD PIN_XPG_RAD2 977 1061 - -
Lal6g1505 1654 SMART xpgineu 991 1060 IPR006086 GO:0004518
Lal6g1505 1654 MobiDBLite consensus disorder prediction 722 757 - -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 1293 1354 - -
Lal6g1505 1654 Pfam XPG N-terminal domain 1 97 IPR006085 GO:0004518
Lal6g1505 1654 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1060 1266 IPR036279 -
Lal6g1505 1654 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 229 - -
Lal6g1505 1654 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 224 1364 - -
Lal6g1505 1654 MobiDBLite consensus disorder prediction 625 651 - -
Lal6g1505 1654 SMART HhH_4 1062 1095 IPR008918 GO:0003677|GO:0003824
Lal6g1505 1654 MobiDBLite consensus disorder prediction 664 687 - -
Lal6g1505 1654 Gene3D - 1060 1173 - -
Lal6g1505 1654 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Lal6g1505 1654 Gene3D - 1 181 - -
Lal6g1505 1654 Gene3D - 912 1059 - -
Lal6g1505 1654 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Lal6g1505 1654 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Lal6g1505 1654 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 462 477 IPR006084 -
Lal6g1505 1654 CDD PIN_XPG_RAD2 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1505 Lal-Chr6 16968416 16984124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1505 985 1092 Core DNA Replication Machinery Family AT5G26680 36.036 1.09e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1505 K10846 - gmx:100820295 2060.8