Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1504 ATGGGTTATCTGAACAAAGCTTCCAAAACCCTACGGCAATGGAAATACATGTCCCCGTTCATTCCATTTACTAACAGAATAACTCATCCACGCTTTTGTTCCCATTCACGCCAAAACAACAAAGAACAAAACGCCATTGATTTGAATCAATACCCTCCAGAACTCGTTAGAAACTTCTCTATCATTGCACATGTTGATCATGGAAAGTCTACTCTTGCTGATCGTCTTCTTGAACTCACTGGAACCATTAAGAAAGGTCATGGCCAGCCTCAATATCTTGATAAATTGCAGGTGGAGAGAGAAAGGGGAATCACAGTTAAAGCTCAGACTGCAACCATGTTCTATAAGCACAGCATAAATGGTGACAATATTAGTGACGGAAAGGAGTCACCTAAATATTTGCTGAATCTTGTTGACACTCCCGGGCACGTGGATTTTAGTTATGAAGTGTCGAGGTCATTGGCAGCTTGTCAGGGTGTGCTTTTGGTTGTTGATGCAGCTCAAGGAGTCCAAGCACAAACTGTTGCTAACTTTTACCTTGCATTTGAGTCTAACTTAACCATTGTACCGGTCATAAACAAGATTGACCAGCCAACTGCCAATCCCGATCTTGTTAAAGCCCAGTTAAAGTCAATGTTTGATCTCGACCCAAGTGATGTACTGCTGACATCTGCTAAGACTGGAGAGGGTCTTGAGAAAATCATTCCGGCAGTCATAGAGCGTATACCTCCGCCTTCTGGGAGTTGCAATTCTCCTCTACGCATGCTTTTGCTTGATTCATATTATGATGAATACAAAGGGGTAATATGCCATGTTGCTGTTGTTGATGGTGCCCTGCGCAAGGGGGATAAGATTTCTACTGTAGCTACTGGTCAGTCATATGAAGTTTTTGATGTAGGCATCATGCATCCTGAACTTAAACCTACCGGAATCTTGCTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGCTCAACCAAAGAGGCACGTATTGGAGATACAATTTACCACACTAAAAGCGCTGTTGAACCTCTCCCAGGCTTCAAGCCAGCAAAACACATGGTATTCTCTGGTCTTTATCCAGCCGATGGATCAGATTTCGAAGCACTCAGCCATGCAATAGAGAGGCTGACATGCAATGATGCCAGTGTCTCTATTACTAAAGAAACTAGCACAGCTCTAGGTCTGGGGTTCAGGTGTGGGTTTTTAGGCTTACTACACATGGATGTTTTTCATCAACGGCTTGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCTACCGTGCCTTATATATTTGAGTATTCTGATGGAAGCAAATTAGAAGTTCAAAATCCTGCTTCGTTACCCTCTAATCCCAAGCAAAAAGTAATAGCCTGTTGGGAACCTACAGTGCTAGCTACTATAATCATTCCTAGTGAGTATGTGGGACCCGTTATTACCCTTGTCTCCGAGCGTAGGGGTCAGCAGTTGGAGCACTCATTCATTGACAGTCAAAGAGTGTTCATGAAGTATCGCATGCCTTTGAGAGAAATTGTTATCGATTTTTATAATGAACTGAAGAGTATAACATCAGGCTATGCATCATTTGATTATGAAGATGCAGATTATCAACAATCCGATCTGGTGAAACTTGATATCCTTTTGAACGGGCAACCCGTTGATGCAATGGCAACCATTGTTCATAAGGTGAAAGCATACCGTGTTGGGCGTGAACTGGTGGAAAAATTGAAGAAAGCCATAGACAGGCAAATGTTTGAGATATCCATACAAGCAGCCATTGGGTCAAAGGTTATTTCTAGGGAGACGATTTCCGCTTTGAGGAAAAATGTTCTTGCCAAGTGTTATGGTGGTGACGTTAGTAGGAAGAGGAAGCTATTGGAGAAGCAGAAGGAAGGAAAGAAGCGAATGAAACGTGTTGGTTCTGTTGATATACCGCAAGAAGCATTCCATGAACTATTGAAGGTTGTGAAACTGAGCACCCTTGCAAATTTCGATGTTGTCGATATTGCTACAAAGAGAGGGCTGCAGAAAACAATAACAGAAATGGTGAAAGCAATGTACTTGATTGGTTTCATGCTAGGATCCTTTTTTGCTTTTCGGGTTGTGAAACTGAGCACCCTTGCAAATTTCGATGTTGTCGATATTGCTACAAAGAGAGGGCTGCAGAAAACAATAACAGAAATGGTGAAAGCAATGTACTTGATTGGTTTCATGCTAGGATCCTTTTTTGCTTTTCGGGTCGATCTCATTCTTAAGTGA 2268 0.422 MGYLNKASKTLRQWKYMSPFIPFTNRITHPRFCSHSRQNNKEQNAIDLNQYPPELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSINGDNISDGKESPKYLLNLVDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTANPDLVKAQLKSMFDLDPSDVLLTSAKTGEGLEKIIPAVIERIPPPSGSCNSPLRMLLLDSYYDEYKGVICHVAVVDGALRKGDKISTVATGQSYEVFDVGIMHPELKPTGILLTGQVGYVVSGMRSTKEARIGDTIYHTKSAVEPLPGFKPAKHMVFSGLYPADGSDFEALSHAIERLTCNDASVSITKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLEVQNPASLPSNPKQKVIACWEPTVLATIIIPSEYVGPVITLVSERRGQQLEHSFIDSQRVFMKYRMPLREIVIDFYNELKSITSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHKVKAYRVGRELVEKLKKAIDRQMFEISIQAAIGSKVISRETISALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVVKLSTLANFDVVDIATKRGLQKTITEMVKAMYLIGFMLGSFFAFRVVKLSTLANFDVVDIATKRGLQKTITEMVKAMYLIGFMLGSFFAFRVDLILK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1504 755 SUPERFAMILY EF-G C-terminal domain-like 355 432 IPR035647 -
Lal6g1504 755 Gene3D - 54 247 IPR027417 -
Lal6g1504 755 Pfam GTP-binding protein LepA C-terminus 551 657 IPR013842 -
Lal6g1504 755 Gene3D Translation factors 248 346 - -
Lal6g1504 755 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 42 657 - -
Lal6g1504 755 SUPERFAMILY EF-G C-terminal domain-like 463 557 IPR035647 -
Lal6g1504 755 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 54 246 IPR000795 GO:0003924|GO:0005525
Lal6g1504 755 CDD EF4_II 253 338 - -
Lal6g1504 755 Pfam Elongation factor Tu GTP binding domain 56 243 IPR000795 GO:0003924|GO:0005525
Lal6g1504 755 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 94 109 IPR031157 -
Lal6g1504 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 288 IPR027417 -
Lal6g1504 755 PRINTS GTP-binding elongation factor signature 58 71 IPR000795 GO:0003924|GO:0005525
Lal6g1504 755 PRINTS GTP-binding elongation factor signature 101 109 IPR000795 GO:0003924|GO:0005525
Lal6g1504 755 PRINTS GTP-binding elongation factor signature 136 146 IPR000795 GO:0003924|GO:0005525
Lal6g1504 755 PRINTS GTP-binding elongation factor signature 188 197 IPR000795 GO:0003924|GO:0005525
Lal6g1504 755 CDD EF4_III 354 429 - -
Lal6g1504 755 CDD LepA 57 245 - -
Lal6g1504 755 TIGRFAM small_GTP: small GTP-binding protein domain 60 235 IPR005225 GO:0005525
Lal6g1504 755 Gene3D Elongation Factor G (Translational Gtpase), domain 3 347 428 - -
Lal6g1504 755 Hamap Elongation factor 4 [lepA]. 52 663 IPR006297 GO:0005525
Lal6g1504 755 TIGRFAM lepA: elongation factor 4 56 658 IPR006297 GO:0005525
Lal6g1504 755 Pfam Elongation factor G C-terminus 464 549 IPR000640 -
Lal6g1504 755 PANTHER TRANSLATION FACTOR GUF1-RELATED 42 657 IPR006297 GO:0005525
Lal6g1504 755 CDD lepA_C 464 543 IPR035654 -
Lal6g1504 755 Gene3D - 543 617 IPR038363 -
Lal6g1504 755 Gene3D - 429 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1504 Lal-Chr6 16907589 16920953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1504 56 197 Eukaryotic Initiation Factors Gene Family AT1G56070 39.583 7.29e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1504 K21594 - gmx:100781092 1165.6