Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1502 ATGAAGTTTCCAAATTCTACCATTCACTTTCTCCTCCTACTTTTTTTCTTCTCTCTTCTCCATAGACCCATCTTTGCAATGAAAAAGTCATATGTTGTCTACTTTGGATCCCACTCACATGATCCACAACTGTCTTCAATTGATTTCAATCAAGTCATTGAATCCCACTATGAGTTTCTTGGATCTTTCTTAGGAAGTTCTAATGCAGCAAAAGAATCAATATTTTACTCTTACACAAGACATATCAATGGTTTTGCTGCAACATTTGAAGAAGGAGTAGCAGCTGAGATTGCAAAGCATCCAAAAGTAATATCAGTATTCTTGAACAATGGGAAGAAACTACACACAACTAGGTCATGGGAATTCATGGGGATAGAGCATGATTATGGGGTCATGCCATCAACCTCAATTTGGAAGAAAGCTAGATATGGTGAAGGTGTCATTATAGGAAATCTTGATACCGGAGTTTGGCCTGAATCCAAGAGCTTTAGTGAAGAAGGGTTGGGACCAATTCCATCAAAGTGGAAAGGAATATGTGATAATGGAGCAGACTCTGGTTTTCATTGCAATAGGAAGCTAATAGGTGCAAGGTACTTCAACAAAGGCTATGCATCAATAACTGGACCACTAAACTCTTCTTTTGACTCACCTCGTGACAATGAAGGCCATGGATCCCACACTCTATCAACAGCAGGTGGTAACATGGTACCTAGGGTCAGTGTCTATGGCCAAGGCTATGGCACTGCAAAGGGTGGCTCACCAAAGTCCCATGTTGCAGCTTACAAGGTTTGTTGGCCCCCAATTAATGGTGATGAGTGTTTTGATGCAGATATCTTAGCTGCTTTTGATATGGCCATTCATGATGGTGTTGATGTTTTGTCTTTGTCACTTGGTGGAAGTTCCACTGATTTTTTCAATGATAGTGTTGCTATTGGGACTTTCCATGCTGCTATGCATGGCATTGTGGTTATTTGTTCTGCTGGTAATAGTGGCCCTGCTGATGCTACTGCTGAGAACCTTGCACCATGGTATATCACAGTTGGTGCTAGCACTATGGATAGAGAGTTCCCTAGCTATGTTGTCCTTGGCAACAACATCACCTTGCAGGGTGAAAGCTTATCTTCTGCAAGGTTGCCACACAAACTCTACCCACTTATTAAAGCTACAGATGCTAAATTGCCTAGTGCAACAGCTGCAGACGCTGTTCTGTGCCAGAATGGAACATTGGATCCTACGAAGGTGAATGGTAAAATCGTCGTATGCCTCCGAGGGATAAATGCAAGAGTGGATAAGGGAGAACAAGCTCTTCTAGCAGGTGCTGTGGGAATGGTTCTTGCCAATGATAAGGCTAGTGGAAATGAAATTTTAGCTGATCCTCATGTTCTTGCAGCATCTCATGTCAATTTCACTAATGGTGTTACTGTCTTTAGTTACATCAACTCAACCAAGTTTCCTGTGGCATATATTACACATCCAAAGACAAAACTGAATACTAAGCCAGCCCCTGTAATGGCAGCATTCTCATCAAAAGGACCAAATACTATTATACCAGAGATCTTAAAGCCTGATATCACTGCACCAGGAGTGTCGGTTATAGCAGCCTACACTGAAGCCGAAGGGCCTACGAATCAGGACTTTGACAAGCGCCGCATTCCATATAACTCAATCTCGGGCACATCAATGTCATGCCCTCACATTTCAGGCATCGTTGGCCTATTGAAAGCGCTATATCCATCATGGAGTCCGGCTGCTATTAAATCGGCAATCATGACCACTGCTACAACATTAGACAACGACGCGGAGCCATTGCTGAATGCTACTGATGGCAAGGCTACACCATTCAGTTATGGTGCAGGACATGCTCGGCCAAACAGCGCAATGGATCCCGGCCTTGTTTACGATTCAACGATCAATGATTATCTGAACTTCTTATGTGCATTAGGCTACAATGGAACACAAATCTCAATATTTTCAGAAAGTCCTTATAACTGTCCAAAGAAATTTAGTGTCCTCAACCTCAACTATCCTTCTATCACAGTCCCACATCTCTCAAGATCAGTAAAAGTTAAAAGGACATTGAAAAATGTTGGTCCTCCAGCGACGTATATCGTTCATGTTCAAAACCCGATCGGGATCACGATTTCGGTGAATCCAAGCATCTTGGAGTTCAAACATGTTGGTGAAGAGAAGAGCTTTAAGGTAACCTTGGTGGCTAAGAAAGGTAAAACAACAAATAACTATGTGTTTGGAAAGTTGACATGGTCAGATAGCAAGCATTATGTAAGGAGTCCAATTGTGGTGAAGGCTTTGTAG 2313 0.4228 MKFPNSTIHFLLLLFFFSLLHRPIFAMKKSYVVYFGSHSHDPQLSSIDFNQVIESHYEFLGSFLGSSNAAKESIFYSYTRHINGFAATFEEGVAAEIAKHPKVISVFLNNGKKLHTTRSWEFMGIEHDYGVMPSTSIWKKARYGEGVIIGNLDTGVWPESKSFSEEGLGPIPSKWKGICDNGADSGFHCNRKLIGARYFNKGYASITGPLNSSFDSPRDNEGHGSHTLSTAGGNMVPRVSVYGQGYGTAKGGSPKSHVAAYKVCWPPINGDECFDADILAAFDMAIHDGVDVLSLSLGGSSTDFFNDSVAIGTFHAAMHGIVVICSAGNSGPADATAENLAPWYITVGASTMDREFPSYVVLGNNITLQGESLSSARLPHKLYPLIKATDAKLPSATAADAVLCQNGTLDPTKVNGKIVVCLRGINARVDKGEQALLAGAVGMVLANDKASGNEILADPHVLAASHVNFTNGVTVFSYINSTKFPVAYITHPKTKLNTKPAPVMAAFSSKGPNTIIPEILKPDITAPGVSVIAAYTEAEGPTNQDFDKRRIPYNSISGTSMSCPHISGIVGLLKALYPSWSPAAIKSAIMTTATTLDNDAEPLLNATDGKATPFSYGAGHARPNSAMDPGLVYDSTINDYLNFLCALGYNGTQISIFSESPYNCPKKFSVLNLNYPSITVPHLSRSVKVKRTLKNVGPPATYIVHVQNPIGITISVNPSILEFKHVGEEKSFKVTLVAKKGKTTNNYVFGKLTWSDSKHYVRSPIVVKAL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1502 770 SUPERFAMILY PA domain 397 483 IPR046450 -
Lal6g1502 770 Pfam Subtilase family 144 602 IPR000209 GO:0006508|GO:0008236
Lal6g1502 770 SUPERFAMILY Subtilisin-like 114 631 IPR036852 GO:0004252|GO:0006508
Lal6g1502 770 Gene3D Peptidase S8/S53 domain 146 640 IPR036852 GO:0004252|GO:0006508
Lal6g1502 770 Gene3D - 353 496 - -
Lal6g1502 770 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Lal6g1502 770 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lal6g1502 770 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Lal6g1502 770 CDD PA_subtilisin_like 359 489 - -
Lal6g1502 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 115 IPR037045 -
Lal6g1502 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Lal6g1502 770 ProSiteProfiles Serine proteases, subtilase domain profile. 119 627 - -
Lal6g1502 770 Gene3D - 644 770 - -
Lal6g1502 770 Pfam PA domain 402 472 IPR003137 -
Lal6g1502 770 CDD Peptidases_S8_3 112 594 IPR034197 -
Lal6g1502 770 PANTHER PEPTIDASE S8 16 769 - -
Lal6g1502 770 Pfam Fibronectin type-III domain 672 767 IPR041469 -
Lal6g1502 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 16 769 - -
Lal6g1502 770 Pfam Peptidase inhibitor I9 30 111 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1502 Lal-Chr6 16882428 16892747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1502 30 768 Subtilisin-like Serine Gene Family AT2G04160 64.690 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1502 - - gmx:100794807 1286.94