Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1429 ATGAATTCCAATTCTAAACACTGCTCAAATGCCATGAAGAACACATCATCATCATGGGTTTTCTTCACCATAGTTTCTCTTCTCCTATTCTCATTTATCCCTCACACAGTCTCTGATCCAAGAATCTCAGAAGCAGGACTCTACTGTGGCATATCCAAATCCCCAACCAATGCCAATTACATCCCAAGCTTCATCAAAGAAATGGAGACTCTCTCACAGCTTGTCACCAACCACAACTGGGGCACTCACTTTGTCAACATCTCACAAATTCCTATTTACGGCTTTGCACAATGCTTCAATGACCTCTCCCACACTGACTGCCTTCTGTGCTACGCCGCGAGCCGCACCAAGCTCCCTCACTGCCTCCCATCGGTTTCGGCCCGAATCTACCTGGACGGATGCTTCCTTCGCTATGACAACTACAGCTTCTATTCAGAACACATTGATCCTTTGAGGGACACTGTGAATTGCACCTCGCAACATGGCGCGATGGTTGATGAGGCTGAGAGGTTGAGGCTTGAGAAGAGTGTGGCTGAAGTGGTTGATAGAGTTGTTATGGTTGCTGTGGGTAAGAAAGGTAGTGGTGGTGGGTTTGGTGTGGCTGAAGTTGAGGGTGTTTATGCAATGGCACAGTGCTGGAACAGTGTTGGGAGTGAAGGGTGTAGAGAATGTTTGAGGAAAGGTGGGAAGGAAGTGAGAAGGTGCTTACCAAAGAAGGAAGGGAGAGCCTTGAATGCTGGCTGTTATTTGAGATATTCAACTGAGAAATTCTACCATGAAAAAGGTGCATCTAAGGGTGGAAAGGTTTTCTATTCTTCAAATTTTCTTGATTATTTGGAGAGTGGATGCTCAATTGAGATTTCTTCTAAAAAGAAGTCTATCTGCGAGTTGGATTTCGGAGGGGATGAAAGAGAAATGAAAGGCTTGAGAGCCATGAAATACACTTGGTTTTTAACAATAGGAACAATAATAGCAGCAGTATTAGCAGTAGCTGCAGTTTTAATGATCTTTCTCTTAGCCACGTATGCTGTCTTCACAAAATTATCAAACATTAAGAAAGAAAGCATCAATCTAAACCAGATTTCTTCTTCCATAAGCATATCTAGCTTGAATTACAAGTATGAAACTCTTGAGAAGGCCACAGATTACTTCAACTCTTCAAGAAAAATAGGCCAAGGAGGAGCTGGTTCTGTATACAAAGGTATTTTCCCAAATGGGAAAGTTGTTGCTGTTAAAAGATTGATCTTCAATAACCGGCAATGGGTTGCCGAGTTCTTCAATGAAGTGAATTTGATTAGTGGAATTGAACACAAGAACCTTGTCAAACTATTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTCCTTGAACTTGACACACGAATCTGCTTTGCAGAAAATAACAAAAATCGAATTCTAAACTGGAAGCAGCGGTTTGATATCATTCTTGGAACAGCAGAAGGGCTTGCATATCTGCATGGAGGCTCTAAAACAAGAATCATTCATAGAGACATAAAATGCAGCAATGTTCTTCTGGATGAGAATCTCATTCCTAAGATTGCAGATTTTGGCCTTGCCCGAGGTTACATGGCTCCGGAGTACCTAATTCGAGGCCAACTTACCGACAAAGCTGATGTTTATAGTTTTGGAGTACTTGTTCTTGAGATTGTATGTGGTAGGAGGAATAATGTCTTCAGAGAAGACTCTGGTTCCCTTATACAAACAAGGGGAAAGAGGCTTCATAGTATCTCGCCAGTGTATTTCATGGTTTGGAAACTTTACAGATCAAACACACTAGCAGAAGCTCTTGATTCTTGCCTAGGAGATGATTTTCCTGCAACTGAAGCATCAAGGGTGTTCCACATTGGATTGCTTTGCGCACAAGCTTCTGCTTCACTGAGGCCATCGATGGCCGAAGTCGTTTACATGTTAAGCAATTCAAATGGACATGTCCCTACACCAAATCAACCCCCATTTTTGAACACCGGAGTGCTAGACTCAGACAGCTCCATTACATCTTATAGAACACACAGCTTCGTATCAAATGCCTTAAATAAGGTTGGAGTGTCCTGCAGCTCCTCAGAGTCCTCTAGTTCAGGCAGCTCAGATAGGCCATCAAGAAGTGAAAAACCAGAATCCAAGCTTCATGTCTAA 2151 0.4277 MNSNSKHCSNAMKNTSSSWVFFTIVSLLLFSFIPHTVSDPRISEAGLYCGISKSPTNANYIPSFIKEMETLSQLVTNHNWGTHFVNISQIPIYGFAQCFNDLSHTDCLLCYAASRTKLPHCLPSVSARIYLDGCFLRYDNYSFYSEHIDPLRDTVNCTSQHGAMVDEAERLRLEKSVAEVVDRVVMVAVGKKGSGGGFGVAEVEGVYAMAQCWNSVGSEGCRECLRKGGKEVRRCLPKKEGRALNAGCYLRYSTEKFYHEKGASKGGKVFYSSNFLDYLESGCSIEISSKKKSICELDFGGDEREMKGLRAMKYTWFLTIGTIIAAVLAVAAVLMIFLLATYAVFTKLSNIKKESINLNQISSSISISSLNYKYETLEKATDYFNSSRKIGQGGAGSVYKGIFPNGKVVAVKRLIFNNRQWVAEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLELDTRICFAENNKNRILNWKQRFDIILGTAEGLAYLHGGSKTRIIHRDIKCSNVLLDENLIPKIADFGLARGYMAPEYLIRGQLTDKADVYSFGVLVLEIVCGRRNNVFREDSGSLIQTRGKRLHSISPVYFMVWKLYRSNTLAEALDSCLGDDFPATEASRVFHIGLLCAQASASLRPSMAEVVYMLSNSNGHVPTPNQPPFLNTGVLDSDSSITSYRTHSFVSNALNKVGVSCSSSESSSSGSSDRPSRSEKPESKLHV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1429 716 ProSiteProfiles Protein kinase domain profile. 384 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1429 716 SMART serkin_6 384 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1429 716 MobiDBLite consensus disorder prediction 689 703 - -
Lal6g1429 716 Pfam Protein kinase domain 385 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1429 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Lal6g1429 716 Pfam Salt stress response/antifungal 60 141 IPR002902 -
Lal6g1429 716 Pfam Salt stress response/antifungal 198 254 IPR002902 -
Lal6g1429 716 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 319 707 - -
Lal6g1429 716 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 30 268 - -
Lal6g1429 716 Gene3D Phosphorylase Kinase; domain 1 344 456 - -
Lal6g1429 716 SUPERFAMILY Protein kinase-like (PK-like) 367 674 IPR011009 -
Lal6g1429 716 Gene3D Transferase(Phosphotransferase) domain 1 457 652 - -
Lal6g1429 716 Gene3D - 47 143 IPR038408 -
Lal6g1429 716 Gene3D - 168 257 IPR038408 -
Lal6g1429 716 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 268 - -
Lal6g1429 716 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 319 707 - -
Lal6g1429 716 ProSiteProfiles Gnk2-homologous domain profile. 151 257 IPR002902 -
Lal6g1429 716 MobiDBLite consensus disorder prediction 689 716 - -
Lal6g1429 716 ProSiteProfiles Gnk2-homologous domain profile. 42 143 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1429 Lal-Chr6 15548773 15552674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1429 12 528 Receptor kinase-like Gene Family AT5G40380 48.204 7.89e-158 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal6g1429 Pkinase 3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1429 - - gmx:100790404 852.432