Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1386 ATGCTTCCACTGCAATTCACCACCCATCCTCACCCTCCATCATCATCATCATCATCATCATTACACATCACCAACCCCAACTCTTGTTCCTTTTGTCCCACGCCTCGCTCTCTGTTCAGCACATATATCAACAGTAACCACCACCGTCTTCATAGACGCAATGCAGGAATGATCGCCGTTAGAATTTTCGCAATGTCCGGTAACTCATCCTCTGCATTCAAAATGAACCTCAATGAGTACCTTGTCACTCTCGACAAACCCCTTGGCATCCGATTCGCTCTCACGGTTGATGGCAAAATCATCGTCCATTCTCTCACCAAAGGGGTACGTGTCGGTAATGCAGAGAGATCGAGGATAATTATGGTGGGTGACACGTTGAAGAAAGCTGGAGACTCATCTCAGAACAGTCTTGTCGAGATTAAAGACGTTGGAGATACAAAGGAAGTACTAAAGGAGCAAACGAGTTCTTTTAGCTTGATTCTTGAGAGGCCCACATCTCCTTTTCCCATTCAACTATTGCATACGATGAATGATCAAGAAATATTGTTTAATATAGGCCGAGTTCCTATCGTAACCTGGAATAAGACACTTTTGGCATCAAGTTTTCAGTCATCTAGTGAGAGCTCTGGGAATTCTGGATTTTTAATGTTCAACTCAAAGTTTCTTAAATCAAAGGGAAGTCAGTTATTGATATATCAAAATGGACATGCCATCACCCATGGTGAGAGAAACTTCTTTACTGAGAACATGCCTCGACTTGTTTGTATTTTTACTGAAGAAGCGTGTGGAGATGGAGACTGGTCTCATGGAAGTTTTCCGATTGAGGAATATATTCAAGCTCTCAATCGTTCCAAGGATGAGATGTACTATAATCACTCCCTTGGTATGCGCTATAGTAAGGTTACTGAGCAAATATATGTCGGATCCTGTATACAAACAGAAGATGATGTGGAAACCTTGTCAAAAGTTGAGGGAGTTACTGCTGTTCTGAATTTCCAGAATGGAACTGAAGCTGAAAATTGGGGAATTGATGTTAAATCAATTAATGACTCATGTCAAAGAAATAATATTCTTATGATCAACTATCCTATACGGGATGGGGATTCATATGATATGAGAAAGAAGCTCCCATTTTGTGTCGGGCTTTTATTACGGTTGCTGAGGAAGAACCTTCGCGTTTTTGTTACTTGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTGCATTGGATGACAGATGTTTCCCTTCACGCCGCTTATACTTGGGTCACTGGGATGCACACATGCAGGCCGGACAGACCGGCAATTGCTTGGGCTACATGGGATCTTATAGCTATGGTTGAAACGGGCAAACACGATGGACCTCCCACACATGCCGTCACGTTTGTGTGGAACGGTCACGAGGGAGAGGATGTAACTTTGGTGGGAGACTTTACTGGAAACTGGAAAGATCCACTCAGAGTAATGCACCAAGGTGGATCAAGACATGAAGTAGAAGTTAAACTTCCACAAGGAAAGTACTACTACAAATTTGTTGTTAATGGACAATGGAAGCATTCAACCGCTTCACCAGCAGAAAGGGACGACAGCGGAAATGTTAACAATATAATTGTGATTGGTGAAACTGCCAGCGTTCGGCCTTTTGGACAGCATCAGCAGAAAGATGCCAACATTGTCAAGGTGATTGAGAGGCTTTTGAACGAAAAAGAGCGGTTTATGTTGGCAAAAGCAGCTCGCTGTATTGCTTTTTCTGTATGTCCTATCAGATTAGCCCCCAAATAG 1794 0.4287 MLPLQFTTHPHPPSSSSSSSLHITNPNSCSFCPTPRSLFSTYINSNHHRLHRRNAGMIAVRIFAMSGNSSSAFKMNLNEYLVTLDKPLGIRFALTVDGKIIVHSLTKGVRVGNAERSRIIMVGDTLKKAGDSSQNSLVEIKDVGDTKEVLKEQTSSFSLILERPTSPFPIQLLHTMNDQEILFNIGRVPIVTWNKTLLASSFQSSSESSGNSGFLMFNSKFLKSKGSQLLIYQNGHAITHGERNFFTENMPRLVCIFTEEACGDGDWSHGSFPIEEYIQALNRSKDEMYYNHSLGMRYSKVTEQIYVGSCIQTEDDVETLSKVEGVTAVLNFQNGTEAENWGIDVKSINDSCQRNNILMINYPIRDGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMVETGKHDGPPTHAVTFVWNGHEGEDVTLVGDFTGNWKDPLRVMHQGGSRHEVEVKLPQGKYYYKFVVNGQWKHSTASPAERDDSGNVNNIIVIGETASVRPFGQHQQKDANIVKVIERLLNEKERFMLAKAARCIAFSVCPIRLAPK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1386 597 SUPERFAMILY E set domains 461 544 IPR014756 -
Lal6g1386 597 CDD DSP_laforin-like 296 442 IPR045204 GO:0019203|GO:0046838
Lal6g1386 597 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 288 430 IPR029021 -
Lal6g1386 597 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 50 597 - -
Lal6g1386 597 Pfam Dual specificity phosphatase, catalytic domain 306 427 IPR000340 GO:0008138|GO:0016311
Lal6g1386 597 Gene3D Immunoglobulins 451 547 IPR013783 -
Lal6g1386 597 ProSiteProfiles Dual specificity protein phosphatase domain profile. 297 456 IPR020422 GO:0006470|GO:0008138
Lal6g1386 597 CDD E_set_AMPKbeta_like_N 464 543 - -
Lal6g1386 597 Gene3D Protein tyrosine phosphatase superfamily 290 550 IPR029021 -
Lal6g1386 597 Pfam Glycogen recognition site of AMP-activated protein kinase 464 545 IPR032640 -
Lal6g1386 597 MobiDBLite consensus disorder prediction 1 22 - -
Lal6g1386 597 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 50 597 IPR030066 GO:0005983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1386 149 597 Protein tyrosine phosphatase (PTP) family AT3G01510 67.261 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1386 - - gmx:100814503 983.015