Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1189 ATGTTCTCTAAAGAGTCAAACGGTAACGGTTACCAACACCACCATCTTCCACCGCCTGAAACCGCTCATAGAGACCGTGTCCGCCGTGGCACGCGCAGGTCACGCGCTTCCACTTCCGGTGATAACCTTTCCATTACCGTTAGGGTTCCCGAGCAGCAACATCTACAACCTCCTCCTTGTACGGACTTCGACATTGCTTATTTCCATTCATACTCTCACCTCGGTATTCACCATGAAATGATCAAGGATCGTGTGCGGACTGAAACATATAGGGAGGCAATCATGCGGCATCAGAGTTTTATTGCAGGCAAAGTGGTAGTTGATGTGGGATGTGGTACAGGAATTCTTTCTATATTTTGTGCTCAAGCTGGTGCAAAGCGGGTGTATGCCGTTGATGCCAGTGAAATTGCCCTGCAGGCAAATGAAGTTGTCAAGGAAAATAATCTGTCTGATGTTGTCATTGTATTACATGGACGAGTTGAGGATGTTGAAATTGACGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATTACGGCCAGAGATCGCTGGCTTAAACCTGGTGGTCTTATTCTTCCTTCAAACGCTACGTTGTTCATGGCCCCTGTAACACATACTGACAGATACAGTGAAAGCATCGACTTCTGGCGCAATGTGTATGGAATTAATATGTCTGCCTTGATACCATTAGCAAAACAGTCTTCATTTGAAGAACCTTCTGTGGAGACAATAACTGGCGAAAATATTTTGACATGGCCACATGAGGTAAAACATATTGATTCGTATTCTGTTTCCATCGATGAGCTAAAAACTGTAACATCAAAGTTTAAGTTCAGCTCAATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTAACGGGCCTGCAATAGCACCAAGCAATTACCATTCAACTTCAATTGTTGACAATCATATGGCGAATGGCAGTCAGAGAAAAAGGAGGACAAATCCTAATGAAGCACTGGTCCTGTCCACCGCACCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATTTACTTATATGATCCATTAGCACTGGAGCAAGATCAGCTGATTGAAGGTTCAGTTACATTGTCACAAAGCAAAGAAAACGCTCGGTTTATGAACATTCACCTCGAATATTCTTGGGTCAACCATTTGAAATTTTCTTGTAATTCTAATTTATCTGTTGTCAAATTTTCTTCATTTTTATGGCCTTTATTTTGGGGCAATATTAATTTGAAAAGTGAACCAAATGATTCCTTTAGAATAAAAACTGGAGAGAAGTCCAATGTTCAATTTCAATAG 1365 0.4168 MFSKESNGNGYQHHHLPPPETAHRDRVRRGTRRSRASTSGDNLSITVRVPEQQHLQPPPCTDFDIAYFHSYSHLGIHHEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASEIALQANEVVKENNLSDVVIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLFMAPVTHTDRYSESIDFWRNVYGINMSALIPLAKQSSFEEPSVETITGENILTWPHEVKHIDSYSVSIDELKTVTSKFKFSSMMRAPLHGFAFWFDVEFNGPAIAPSNYHSTSIVDNHMANGSQRKRRTNPNEALVLSTAPEDPPTHWQQTLIYLYDPLALEQDQLIEGSVTLSQSKENARFMNIHLEYSWVNHLKFSCNSNLSVVKFSSFLWPLFWGNINLKSEPNDSFRIKTGEKSNVQFQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1189 454 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 406 IPR029063 -
Lal6g1189 454 Gene3D - 208 412 - -
Lal6g1189 454 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 64 397 IPR025799 GO:0016274|GO:0018216
Lal6g1189 454 PANTHER BNAC03G41340D PROTEIN 45 402 - -
Lal6g1189 454 MobiDBLite consensus disorder prediction 17 35 - -
Lal6g1189 454 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 45 402 IPR025799 GO:0016274|GO:0018216
Lal6g1189 454 MobiDBLite consensus disorder prediction 1 46 - -
Lal6g1189 454 CDD AdoMet_MTases 106 205 - -
Lal6g1189 454 Pfam Ribosomal protein L11 methyltransferase (PrmA) 102 176 - -
Lal6g1189 454 Gene3D Vaccinia Virus protein VP39 62 206 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1189 Lal-Chr6 9303143 9326262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1189 67 381 C2H2 Transcription Factor Family AT3G12270 39.091 3.87e-67 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g1086 22 9789953 9804658 Lal6g1189 6 9303143 9326262 LSH