Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1166 ATGTCTCAGCCATCCAGGGTCCTGCCTTCTCTCCAGTCTATCAAATCGTTGCCTCCTACATTCAGGACTACTGGTGATCAAACCCCTGATTTTGTGGAAAAACAACGGGATCTTAAATTGAGAAGCACTGATGTTAATGGATCAAGTAGTGCCGAAAATGGTGCTCTAGTAGAAGAGGTTTCGGAGGAAGTTGTCCAGGTATACACTGGTGAGTCGGGTCTTTTTAATGAGGATTTGGCATATAGTAGAAAAGGTGAATCATTAGAAGGCAGACCATCAATTGCTGATGAAGGAGTAGAATCTGTTCCCCTGGCCTTCCCATCAATTTCACTGTCCTCAAGGGAACGCAGATGGAGTGATACAACACCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTCCAAATGGGCATTGGGAGCTGGGAAAGATAATAACAAGTTCTGGAACTGAATCTGTCATTTCACTGCCTGACGGGCAGGTTTTAAAGGTGAAAGAAGAAAGTTTGGTCCAAGCAAATCCTGATATTCTTGATGGAGTTGATGATCTCATGCAACTTAGTTATTTAAATGAACCTTCAGTTTTATACAATCTGCATTATAGATACAGTCAAAATATGATTTATACAAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTTAAGATAGTTCCTCTGTATGGTACTGATTATATTGAAGCCTACAAGCGCAAAGCAATTGAAAGCCCTCATGTTTATGCGATTGCAGATACAGCCATCCGAGAAATGATACGAGATGAAGTTAATCAATCCATAATTATAAGTGGTGAGAGTGGAGCAGGAAAGACCGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAATATGAGATACTGAAAACTAATCCAATACTAGAAGCCTTTGGTAATGCGAAAACATTGAGAAATAACAACTCAAGTCGTTTTGGAAAACTCATTGAGATTCACTTCAGTGAAACTGGAAAAATCTCTGGTGCTAATATTCAAACATGGAAGCTAAATCTACGAAATGCGGAAGACTATAAGTATCTGAGGCAGAGTAATTGTTATTCAATTGCTGGTGTTAATGATGCAGAAGAATTTCGCATAGTCGTGGAAGCTCTTGATGTTGTCCACATTAGTAAAGGAGACCAAGAGAGTGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCGTTTGCTGTGATTGACAATGACAATCATGTTCAAGCCGTAGAAGATGAGGGTCTGCTCAATGTCGCCAAATTGATTGGATGTAACATTGAAGATCTCCAGTTGACTCTATCAACTCGCAAGATGAAAGTTCGTAATGATAAGATTGTCCAAAAGTTGACACTATCACAGGCAATGGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTATTTGATTGGTTGGTTGAACAAATAAATAGATCGCTTCAAGTTGGCAAACGACGTACTGGCAGATCTATCAGTATTCTGGATATCTATGGCTTTGAATCATTCAATAGGAACAGTTTTGAACAATTCTGCATAAACTATGCAAATGAGAGATTACAGCAACATTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATACAAGATGGCATTGACTGGGCTAAAGTCGAATTTGAAGACAACCAAGACTGCCTCAATCTTTTTGAGAAGAGACCACTGGGGTTATTATCCTTGTTAGATGAAGAGTCCACTTTCCCAAATGGGACAGATTTAACATTTGCTAACAAGCTTAAACAGCATTTGAGTTCTAACTCATGTTTCAAAGAAGAACGAGACCAAGCCTTTACTGTTTGTCATTATGCTGGCGAGGTCTCCTATAATACCACGGGATTTCTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCTTCATGCACATGTCACCTTCCTCAAATATTTGCATCCCTTATGCTTACGCAGTCTGAGAAGCCAATAGTTGGTCCCTTGCACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGCGTTGGAACAAAATTCAAGGGTCAATTGTTCCAACTGATGCAACGTTTGGAGAGCACAACACCACATTTTATTCGCTGCATTAAGCCCAATAATCTCCAATCACCTGAATTATATGAGCAAGGGCTTGTATTGCAGCAGCTGAGATGCTGTGGGGTCCTTGAAGTGGTTCGAATATCAAGATCGGGCTTTCCAACACGAATGTCTCACCAAAAGTTTGCCAAAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGATCCACTCAGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACTGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGTACCCTCCATGGTATTTTGCGTGTCCAAAGTTGCTTCAGGGGTTACCAAGTTCGATGCTCTCTCAATGACTTTCGGGGAGGAATCACTACTCTGCAGTCATTTATTAGGGGCGACAAAATCAGAAAAGCATTTGCAGCTCTGCTTCAGAGACATAGAGCTGCTGTTGTTATACAGAAGTGGATTAAAGCAGTATATGCAAGAAACAGAGCGAAGGCAATAAGTGATGCTTCAATTGTCATACAATCAGTTATTCGTGGTTGGTTGGTCAGAAGGTGCTCAGGAAATATAGGATTTTTGAAATCCCTAGATATGAAGACTAATGGGTCAGGTGAGGTTCTGGTGAAGTCATCTTTCTTGGCTGATTTACAGCGCCGGGTACTTAAGGCTGAAGCTGCCCTCAGAGTGAAAGAAGAGGAAAATGACATCCTTCACCAACGTCTCCAACAATACGAGAGCAGATGGTCCGAGTATGAAATGAAGATGAAATCCATGGAAGAAGTGTGGCAAAAACAAATGAGATCCCTGCAATCTAGCCTCTCCATTGCGAAGAAGAGCCTTGCAATTGATGATTCCGAAAGAAATTCAGATGCATCCGTTAATGCAAGTGATGAGCGGGATTACAGCTGGGAAGTAGGAACTAATCACAAGCGCCAAGAAAGCAATGGGACAAGATCAATGAGTGCTGGTTTAAGTGTCGTAAGTAGGCTGGCCGAAGAATTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAGTGGAAGCAAGTTTGAACCCAGACCAAGAACTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTACGGGACAAGATTGCGCGAAACAAAGGTCATCTTAAATAAACTTGGAAGTGAAGATGGTGCACTTGATAAAATGAAAAAGAAATGGTGGGGAAGAAGGAACAGCACAAGGAGCCATTTGAAGTATATATGTTATCTATATGATAATATGTGGCATAGCATCAGTGATAAAAGTGAATATTTTTTCTCTCTAGAATATTCCCCTTTTGTATCCAAACTTGGACCAAGAATGAATTATTATAATTTCATCAGTCTTGAAGAAAAATACAAACTGATTAACTATAAATCATGGAAACACAAATCAGAATATGTAACAGCATTAAATATATTTCTCATTTTTACGATGTTCATATTCAAACATCGTAAAAATCAATTTCAACTAAAGCAGGCTAATCCATTTCAACTAAAGTTAATGATCATATTCAAACATCAATTTGTGAATGACAGATAA 3765 0.3965 MSQPSRVLPSLQSIKSLPPTFRTTGDQTPDFVEKQRDLKLRSTDVNGSSSAENGALVEEVSEEVVQVYTGESGLFNEDLAYSRKGESLEGRPSIADEGVESVPLAFPSISLSSRERRWSDTTPYASKKKLQSWFQLPNGHWELGKIITSSGTESVISLPDGQVLKVKEESLVQANPDILDGVDDLMQLSYLNEPSVLYNLHYRYSQNMIYTKAGPVLVAINPFKIVPLYGTDYIEAYKRKAIESPHVYAIADTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNNNSSRFGKLIEIHFSETGKISGANIQTWKLNLRNAEDYKYLRQSNCYSIAGVNDAEEFRIVVEALDVVHISKGDQESVFAMLAAVLWLGNISFAVIDNDNHVQAVEDEGLLNVAKLIGCNIEDLQLTLSTRKMKVRNDKIVQKLTLSQAMDARDALAKSIYACLFDWLVEQINRSLQVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLSSNSCFKEERDQAFTVCHYAGEVSYNTTGFLEKNRDLLHLDSIQLLSSCTCHLPQIFASLMLTQSEKPIVGPLHKSGGADSQKLSVGTKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPELYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFAKRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQVRCSLNDFRGGITTLQSFIRGDKIRKAFAALLQRHRAAVVIQKWIKAVYARNRAKAISDASIVIQSVIRGWLVRRCSGNIGFLKSLDMKTNGSGEVLVKSSFLADLQRRVLKAEAALRVKEEENDILHQRLQQYESRWSEYEMKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWEVGTNHKRQESNGTRSMSAGLSVVSRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGTRLRETKVILNKLGSEDGALDKMKKKWWGRRNSTRSHLKYICYLYDNMWHSISDKSEYFFSLEYSPFVSKLGPRMNYYNFISLEEKYKLINYKSWKHKSEYVTALNIFLIFTMFIFKHRKNQFQLKQANPFQLKLMIIFKHQFVNDR 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1166 1254 MobiDBLite consensus disorder prediction 1 30 - -
Lal6g1166 1254 ProSiteProfiles IQ motif profile. 845 873 IPR000048 GO:0005515
Lal6g1166 1254 SMART iq_5 843 865 IPR000048 GO:0005515
Lal6g1166 1254 SMART iq_5 869 891 IPR000048 GO:0005515
Lal6g1166 1254 SMART iq_5 820 842 IPR000048 GO:0005515
Lal6g1166 1254 SMART iq_5 892 914 IPR000048 GO:0005515
Lal6g1166 1254 ProSiteProfiles IQ motif profile. 823 850 IPR000048 GO:0005515
Lal6g1166 1254 Gene3D - 752 820 - -
Lal6g1166 1254 Coils Coil 939 987 - -
Lal6g1166 1254 Gene3D Kinesin motor domain 149 348 IPR036961 -
Lal6g1166 1254 Gene3D - 349 388 - -
Lal6g1166 1254 MobiDBLite consensus disorder prediction 1 28 - -
Lal6g1166 1254 CDD MYSc_Myo8 194 807 IPR036022 -
Lal6g1166 1254 Pfam Myosin head (motor domain) 348 807 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 Gene3D - 823 871 - -
Lal6g1166 1254 Gene3D - 872 915 - -
Lal6g1166 1254 ProSiteProfiles Myosin motor domain profile. 180 819 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 349 - -
Lal6g1166 1254 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 348 1142 - -
Lal6g1166 1254 PANTHER MYOSIN 9 349 - -
Lal6g1166 1254 PANTHER MYOSIN 348 1142 - -
Lal6g1166 1254 Pfam IQ calmodulin-binding motif 895 911 IPR000048 GO:0005515
Lal6g1166 1254 MobiDBLite consensus disorder prediction 1012 1046 - -
Lal6g1166 1254 Gene3D Kinesin motor domain 500 748 IPR036961 -
Lal6g1166 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 867 IPR027417 -
Lal6g1166 1254 SMART MYSc_2a 174 820 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 Gene3D Myosin VI head, motor domain, U50 subdomain 390 687 - -
Lal6g1166 1254 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 PRINTS Myosin heavy chain signature 306 333 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 PRINTS Myosin heavy chain signature 505 533 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 PRINTS Myosin heavy chain signature 558 586 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1166 1254 Gene3D - 515 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1166 Lal-Chr6 9014863 9042128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1166 6 1142 Myosins gene family AT1G50360 71.587 0.0 1680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1166 - K10357 gmx:100796845 1949.1