Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1164 ATGTCTAACTCTGACGGAACAACTAACACCGTCATCAACGACACAGTCATTGACTCACCCCATCCTCAGCCGCCACACCGAGACGGTGCTCTAGCCGTTAAGAAACCGCCGTCCAAGGATCGTCACAGCAAAGTTGACGGTCGCGGACGGCGCATACGCATGCCTATCATATGTGCCGCGCGTGTGTTCCAGCTCACACGTGAGCTCGGTCATAAGTCTGACGGCCAAACCATTGAGTGGCTCCTCCGTCAGGCTGAACCTTCCATCATTGCTGCCACCGGAACGGGAACTACTCCGGCGAGCTTCTCCACCGTATCTGTCTCTGTCCGCGGTGGTGGTACTTCTAACTCCCTCTCTTCCCCTTCTTCCACTACCTCAGCTTCTCAACAACACAAGACGTTTCTCGCTCCGACTTCCTTCATTTTCGGGAAGAAAATAAGGACTGACGACGAGGACCCCACCAAGGATAACAACGACGGAGTTTCCGTGGGATCCTTGGTGGGGCCTAATGTGCCAGCTGGGCTGTGGGCCCTTCCTGCTCGACCTGAAATCGGGCAGGTCTGGAGCTTTGCTGCTGCGACACCAGAATTGATGTCGCAGCAGCATAATTCATTTTTAATTCATCAGCAGCAACAACAACAACATCATCAAGTAGCTATGGGAGAAGCTTCGGCGGCGCGGCTCGGAAATTACCTTCCGGGACATCTGAATTTGCTGGCTTCATTGTCAGGAGGGCACAACAATTCCGGCATGAGAGATGATGAATCTAATTGA 774 0.5323 MSNSDGTTNTVINDTVIDSPHPQPPHRDGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGTSNSLSSPSSTTSASQQHKTFLAPTSFIFGKKIRTDDEDPTKDNNDGVSVGSLVGPNVPAGLWALPARPEIGQVWSFAAATPELMSQQHNSFLIHQQQQQQHHQVAMGEASAARLGNYLPGHLNLLASLSGGHNNSGMRDDESN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1164 257 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Lal6g1164 257 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 254 IPR005333 GO:0003700
Lal6g1164 257 MobiDBLite consensus disorder prediction 32 49 - -
Lal6g1164 257 Pfam TCP family transcription factor 38 132 IPR017887 -
Lal6g1164 257 MobiDBLite consensus disorder prediction 1 17 - -
Lal6g1164 257 MobiDBLite consensus disorder prediction 1 49 - -
Lal6g1164 257 MobiDBLite consensus disorder prediction 110 130 - -
Lal6g1164 257 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1164 Lal-Chr6 8980179 8980952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1164 30 255 TCP Transcription Factor Family AT5G23280 62.232 1.34e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal6g1164 TCP 5.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1164 K16221 - cpap:110813909 306.219