Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1154 GCTGGTCAACTCAGTTTTGTAGTTGGATCTCATATTTGGATTGAGGATTTTGATGAAGCTTGGAAGGATGTTGAAATCCTTGAATCCAATGATCAAGATATCACAGTTAGTAGTGAATCAGGGACAAAGGAGGATTTAGTAGGCATTTTCCATACTGGTGAGATGATTTCAAAACCTGTTGTGGGCCCGCTTTCACATGGGGTTTTGAGTAAATCATCTAATATTTATCCCAAAGATCCTGAATTTCCACCTGATGGTGTTGATGATATGACAAGGCTGGCATATCTGCATGAACCAGGGGTACTTCAAAATTTGCAAGTTCGATACGACGTAAATGAAATATATACATACACAGGGAATATATTGATAGCTGTGAACCCTTTCAGAAGGTTACCTCATTTGTATGCGAATGAAACAATGGCGCGATATAAAGGTGCCGGTATTGGCGAGCACAGCCCGCATCCTTTTGCAATTGCAGATTCTGCATATAGGAGAATGATAAACGACGGAGCGAGCCAAGCTATTTTAGTTAGTGGAGAAAGTGGAGCTGGTAAAACTGAAAGTACAAAGATGCTTATGCATTATCTTGCTTACATGGGAGGGAGAGCAGTAACTGAGGGGCGGTCCGTGGAGCAACAAGTTCTGGAGTCCAATCCTGTTTTAGAAGCATTTGGAAATGCAAAGACTGTCAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATACAGTTTGATCAAAAGGGAAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAAAGATCTCGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCAAAAGAGGATGTTAATAGGTTCAAATTAGGAAATCCAAGACAGTTTCATTACCTAAATCAATCAAATTGCTACGAACTGGATGCGCTCGATGATTCTAAGGAGTACCTCGCAACCAGAAGAGCAATGGATGTTGTTGGCATCAGCTCTGATGAGCAGGATGCTATATTTCGAATAGTTGCTGCAGTACTTCATTTAGGAAACATTGAATTTGTTAAGGGAGTGGATGATGGGACAGATTCCTCTCAACCCAAAGATGACCAGTCCCGTTTCCACCTAAACACTGCGGCTGAACTTTTGATGTGTGACGAGCAATCCCTTGAAGACTCTTTCTGCAAACGCGTTATGGTGACTCGTGGGGATACCATAACAAGATCACTTGATCCAAATTCTGCAGCTCTCAGTAGAGATGCATTGGCCAAAATAGTTTATTCAAGGCTTTTTGACTGGATAGTGGACAAGATTAACAACTCCATTGGGCAAGATCCAAATTCAAAGAACTTAATTGGGGTTCTAGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAGTTGCAGCAACATTTCAACCAGCATGTATTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAAATTGACTGGAGTTATATAGAATTCGTTGATAATCAGGATGTTCTTGATCTCATAGAAAAGAAACCTGGCGGCATTATTGCTCTTCTGGATGAGGCCTGTATGTTTCCAAGATCAACTAATGAAACATTTGCCGAAAAGCTATACCAAACATTTAAAGACAATAAACGCTTCAGCAAGCCAAAGTTGTCTCGAACGGATTTCACCGTTAACCACTATGCTGGTGATGTTACTTATCAAACCGAGTTGTTCCTTGATAAAAATAAGGACTATGTTGTTCCAGAGCATGCTGCCCTGCTCAGAGCTTCGAAGTGCTCCTTTGTTGCCGGGCTATTCCCACCTTTACCCGAGGACACTACCAAATCAACAAAGTTCTCCTCTGTAGCCACACAGTTTAAGCAACAACTGCAATCTTTGCTTGAAACACTGAGTGCTACTGAGCCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTCGAGAATATTAACGTGTTGCAGCAGCTTCGGTGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGGAAGAGTTTTGATGAATTTGTTCAGCGGTTTGCTATCCTAGAACCTAAGGTTCTTAAAGCATGCCCTGACGAGATGACAGCTTGCAAGAGGATTCTAGATAAAGCAAACCTTAAAGATTACCAGATTGGACAAACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCTTAGGACGATCGGCAACTGTTATTCAAAGAAATGGTCGCACATATATTTGTCGGAAACAATACGTTTTATTTCGGCTGTCCACCATAGAACTACAAAGGGTTGCAAGAGGACAACTTGCACGCTACCGGTATGAATACATGAGGAGGGAAGCTGCTTCTTTGAAAATCCAAAAACAATGTCGCATGCATCTTTCCAGAACTGCTTACAAAACCATTTATGTCTCTGCTGTTCATATTCAAGCTGGTATGCGAGGGATGACAGCCAGGAATGACCTTAGATTCAGGAAGCGGACACAAGCTGCGACTGTTATCCAGAGTCACTGCAGAAGTTTTTTAGCTCGCATTCGTTTCCGAAGGCTAAAGAAAGCAACAATAGCTGTACAATGTTCTTGGAGAAGAACAATTGCACGAAGAGAACTTCGAAAGCTTAGAATGGCTGCTAGGGAATCCAAAGCTCTTGAAGCTGCCAAAGTTAATCTAGAAAAGCAAGTCGAAGAACTAACTTCGTGTCTAGAAACTGAGAAGAGAATGAGGTTATACTATTTTGCTGACTTTCTAATTGTTTTGGATCGTTGTGATATTGAGGAAGCTAAGACACAGGAAAATGAAAAACTACAGTCTAGTTTGCATGAGATAGAGCTTCAGTTCCAAGAAGCTAAGGCAATGCTCATTCAGGAACGCGAGGCTGCCAAAAAAGCAGCTGAACGTATAGAAGAGATTACTGCCAATGCCGTTGACAATGAATTACACAATAAGCTTACAGAAGAAAATGAACAACTCAAGGAGCTGGTTAATTCACTCGAAAAGAAAACTACAACTGAGATTCCTGTCAATGTCGTTGACAATGAATTGCTCAATAAGCTTACATCAGAAAATGAACAACTCAAGGAGCTGGTTAATTCACTCGAAAAGAAAACTACACCTGAGATTCCTGTCAATGTCATTGACAATGAATTGCTCAATAAGCTTACAGAAGAAAATGAACAACTCAAGGAGCTGGTGAGCTCATTCGAAAAGAAAAGTACACACGAGTTTTCTGTTAATGTTACTGACAATGAATTGGTCAATAAGCTCACAGCAGAAAATGAACAACTCAAGGAGCTGGTTAATTCATTCGAAAAGAAAACTAAAGATGAGTTTTCTGTTAATGTTACTGACAATGAATTGGTCAATAAGCTTAGTGCAGAAAATGAACAACTCAAGGAGCTGGTTAATTCATACGAAAAGAAAACTACACATGAGGTTTCTGTTAATGTTACTGACAATGAATTGATCAATAAGCTTAATGCAGAAAATAAACAACTCAAGGAGATGGTAGATTCATTGGAAAAGAAAACCAAACTGGAACTCCCTGTTAATATTAGTGAGAATGAATTGATCAATAAGCTTTCTTCAGAAAATGAACACTTCAAGGATCTGGTTAATTCATTGGAAAATAAAATTGACGAAACGGAGAGGAAATATCAAGAAAGCAGCAAGCTAAGTGATGACCGCATGACTCAAATTATGGAGACAGAAACAAGGATGATTGACTTAAAGACATCTATGCAAAGGCTTGAAGAAAAGCTCTCTGATATGGAAACTGAGAATCAAGTTTTACGGCAGCAAACCTTGCTGAGTTCATCATCTATGAGAAAGTCAGGAAAGTTTTCGACTGCTGCAATTCCGCCTTTGGAAAATGGTCATCAGGCACCACCAAGTTCTACACCTGCAAAACCTTTTGGTTCAGAATCTATGAGGAGATCTCAAATGGAGAGACAACATGAGAGTGTAGATGCTCTGTTTAAATGTGTGGCAAAAGAACAAGGATTTTCTGAAGGAAAACCTGTTGCAGCATTTACCATTTATAATTGTCTGCTACATTGGAAAGCTTTCGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAACTTATTGGTTCTGCAATAGAGGATCAGGACAACAATGATAACATTGCTTATTGGTTATCCAACACATCTGCTTTGTTGTTTCATCTTCAACGGTGTCTAAGAGTGCCTACAACAAAGAAACCACCCACTCCAACATCATTTTTTGGGAGGATGACCCAAGGTTTCCGCTCTTCCAACAGTCTTTCCAGTAGTGCATTTGATGTCGTGCATCAGGTCGATGCCAAGTATCCGGCTTTGCTTTTCAAGCAGCAGCTAGCAGCTTACGTGGAAAAGATTTATGGAATCATTAAAGAAAATTTGAAGAAAGATTTGTCACCTCTTCTTTCTTCTTGCACTCAGGCACACAAAACAACAAATGATAACAACCAACCAGATGTTTCTTGGCTCAGCATTATTGAATGTCTCAATAAATTTCTCAAGATTCTGAAAGAAAATTATGTACACCCTGTTCTAGTTCAGAAGATATTTAACCAGATTTTTCAATACATCAATGTGGAAATCTTCAATAATCTTCTTTTACATCAAGAATGCTGCACATTCATCAATGGAGAACATGTAAAAGCAGGATTGGCTGAACTAGAACTATGGTGTAGCGAAGCAACGGAGGAGTATGTTGGCTCTCCTTTGGATGAACTCAAACACGCGACGCAAGCAGTTAGATTCTTGGTTGTACGGCAAAAGGATGGACTAACCTATGATGATCTTACAAATGACCTCTGCCCTGTCCTGAGTGCTCATCAACTTTATAGAATATGTACACTTTATCAGGATGACACTGAGAATATGCATAGTGTATCACCAGATGTCACAACTAGCTTGAAGTTTCTAATGTCAGATGATGAAGAAAATGATAGCAAATCCTTCTTATTGGAAGACAATTCAAGTATTCCTATTATAGTTGAAGAGGTTTCTAGTTCCATTAAAGAAAAGACTATTCCTAAAGTAAAACCTCCTTCAGAACTTCTTGAGAATCCAGCCTTCCAATTTTTACATGATTATAGTTAG 5196 0.394 AGQLSFVVGSHIWIEDFDEAWKDVEILESNDQDITVSSESGTKEDLVGIFHTGEMISKPVVGPLSHGVLSKSSNIYPKDPEFPPDGVDDMTRLAYLHEPGVLQNLQVRYDVNEIYTYTGNILIAVNPFRRLPHLYANETMARYKGAGIGEHSPHPFAIADSAYRRMINDGASQAILVSGESGAGKTESTKMLMHYLAYMGGRAVTEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDVNRFKLGNPRQFHYLNQSNCYELDALDDSKEYLATRRAMDVVGISSDEQDAIFRIVAAVLHLGNIEFVKGVDDGTDSSQPKDDQSRFHLNTAAELLMCDEQSLEDSFCKRVMVTRGDTITRSLDPNSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTNETFAEKLYQTFKDNKRFSKPKLSRTDFTVNHYAGDVTYQTELFLDKNKDYVVPEHAALLRASKCSFVAGLFPPLPEDTTKSTKFSSVATQFKQQLQSLLETLSATEPHYIRCVKPNNLLKPGIFENINVLQQLRCGGVMEAIRISCAGYPTRKSFDEFVQRFAILEPKVLKACPDEMTACKRILDKANLKDYQIGQTKVFLRAGQMAELDACRAEVLGRSATVIQRNGRTYICRKQYVLFRLSTIELQRVARGQLARYRYEYMRREAASLKIQKQCRMHLSRTAYKTIYVSAVHIQAGMRGMTARNDLRFRKRTQAATVIQSHCRSFLARIRFRRLKKATIAVQCSWRRTIARRELRKLRMAARESKALEAAKVNLEKQVEELTSCLETEKRMRLYYFADFLIVLDRCDIEEAKTQENEKLQSSLHEIELQFQEAKAMLIQEREAAKKAAERIEEITANAVDNELHNKLTEENEQLKELVNSLEKKTTTEIPVNVVDNELLNKLTSENEQLKELVNSLEKKTTPEIPVNVIDNELLNKLTEENEQLKELVSSFEKKSTHEFSVNVTDNELVNKLTAENEQLKELVNSFEKKTKDEFSVNVTDNELVNKLSAENEQLKELVNSYEKKTTHEVSVNVTDNELINKLNAENKQLKEMVDSLEKKTKLELPVNISENELINKLSSENEHFKDLVNSLENKIDETERKYQESSKLSDDRMTQIMETETRMIDLKTSMQRLEEKLSDMETENQVLRQQTLLSSSSMRKSGKFSTAAIPPLENGHQAPPSSTPAKPFGSESMRRSQMERQHESVDALFKCVAKEQGFSEGKPVAAFTIYNCLLHWKAFEAEKTSIFDRLIQLIGSAIEDQDNNDNIAYWLSNTSALLFHLQRCLRVPTTKKPPTPTSFFGRMTQGFRSSNSLSSSAFDVVHQVDAKYPALLFKQQLAAYVEKIYGIIKENLKKDLSPLLSSCTQAHKTTNDNNQPDVSWLSIIECLNKFLKILKENYVHPVLVQKIFNQIFQYINVEIFNNLLLHQECCTFINGEHVKAGLAELELWCSEATEEYVGSPLDELKHATQAVRFLVVRQKDGLTYDDLTNDLCPVLSAHQLYRICTLYQDDTENMHSVSPDVTTSLKFLMSDDEENDSKSFLLEDNSSIPIIVEEVSSSIKEKTIPKVKPPSELLENPAFQFLHDYS 1731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1154 1731 Pfam DIL domain 1552 1655 IPR002710 -
Lal6g1154 1731 Gene3D - 464 648 - -
Lal6g1154 1731 Gene3D - 275 333 - -
Lal6g1154 1731 CDD MYSc_Myo11 99 745 IPR036018 -
Lal6g1154 1731 Coils Coil 1219 1253 - -
Lal6g1154 1731 Gene3D Myosin VI head, motor domain, U50 subdomain 335 626 - -
Lal6g1154 1731 Pfam IQ calmodulin-binding motif 857 877 IPR000048 GO:0005515
Lal6g1154 1731 Pfam IQ calmodulin-binding motif 762 780 IPR000048 GO:0005515
Lal6g1154 1731 Pfam IQ calmodulin-binding motif 810 829 IPR000048 GO:0005515
Lal6g1154 1731 SMART DIL_2 1551 1658 IPR002710 -
Lal6g1154 1731 Coils Coil 1009 1032 - -
Lal6g1154 1731 ProSiteProfiles IQ motif profile. 834 860 IPR000048 GO:0005515
Lal6g1154 1731 ProSiteProfiles IQ motif profile. 879 908 IPR000048 GO:0005515
Lal6g1154 1731 Coils Coil 902 936 - -
Lal6g1154 1731 Coils Coil 1149 1169 - -
Lal6g1154 1731 ProSiteProfiles Myosin motor domain profile. 85 757 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 CDD MyosinXI_CBD 1344 1698 IPR037975 GO:0007015
Lal6g1154 1731 MobiDBLite consensus disorder prediction 1296 1338 - -
Lal6g1154 1731 Pfam Myosin head (motor domain) 87 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 Gene3D Kinesin motor domain 88 687 IPR036961 -
Lal6g1154 1731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 811 IPR027417 -
Lal6g1154 1731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 811 907 IPR027417 -
Lal6g1154 1731 ProSiteProfiles IQ motif profile. 808 834 IPR000048 GO:0005515
Lal6g1154 1731 PRINTS Myosin heavy chain signature 115 134 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 PRINTS Myosin heavy chain signature 172 197 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 PRINTS Myosin heavy chain signature 219 246 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 PRINTS Myosin heavy chain signature 454 482 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 PRINTS Myosin heavy chain signature 507 535 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 Coils Coil 1114 1134 - -
Lal6g1154 1731 Gene3D - 810 857 - -
Lal6g1154 1731 Gene3D - 858 908 - -
Lal6g1154 1731 Gene3D - 760 809 - -
Lal6g1154 1731 Coils Coil 1177 1204 - -
Lal6g1154 1731 MobiDBLite consensus disorder prediction 1321 1335 - -
Lal6g1154 1731 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Lal6g1154 1731 Coils Coil 1072 1099 - -
Lal6g1154 1731 Gene3D - 692 755 - -
Lal6g1154 1731 ProSiteProfiles IQ motif profile. 784 812 IPR000048 GO:0005515
Lal6g1154 1731 PANTHER MYOSIN 4 1728 - -
Lal6g1154 1731 ProSiteProfiles Dilute domain profile. 1393 1676 IPR002710 -
Lal6g1154 1731 SMART MYSc_2a 79 758 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal6g1154 1731 Coils Coil 1261 1295 - -
Lal6g1154 1731 PANTHER MYOSIN HEAVY CHAIN 4 1728 - -
Lal6g1154 1731 SMART iq_5 759 781 IPR000048 GO:0005515
Lal6g1154 1731 SMART iq_5 782 804 IPR000048 GO:0005515
Lal6g1154 1731 SMART iq_5 830 852 IPR000048 GO:0005515
Lal6g1154 1731 SMART iq_5 855 877 IPR000048 GO:0005515
Lal6g1154 1731 SMART iq_5 807 829 IPR000048 GO:0005515
Lal6g1154 1731 SMART iq_5 878 900 IPR000048 GO:0005515
Lal6g1154 1731 Coils Coil 954 1002 - -
Lal6g1154 1731 Coils Coil 1044 1064 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1154 Lal-Chr6 8860996 8877439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1154 1495 1729 Myosins gene family AT1G04600 54.468 3.08e-63 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1154 K10357 - gmx:100791031 2409.41