Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1151 ATGATGGAGAATTCAATCGGAAAATCAAGTCCCAGTGTTGATGCTGCAATTCCTTCTTTACAGTCTCCTAAACAAGAGGGCAAGAGGGAGGGTGAGGATGATCTCGAGAAGCTAGCGTGTTCAAAGAAGCGGAAGAGAGATGAGGTTGCTGAGAAGCAAAAGAATGTGAGCGAAATTAGGTCAGATGATTCCTCATTATATTCTGAACAAGATCAGGATCAGAAGTCTGCTAAAAATGGCACACCGGAGAATGAAGACAATCCGGATACCAGATCTAATTCTTCTGAATACTCAGGTGGTGATTCTGATGAGGATAAAGCGGTAATGGATATTGATCAGGGTGATAATTCTGAAGAAAGTGACGCAGAGACACAGAAGAAAAAGATGAAAACCTTGCAATGTACTGCATCAAATTCTCAAAAACATGATTCAAAGACTGTTGTAAGGGATACTTCTAGTGATATATCAGATGGTGATGATGGTAATAAAGACAATGACGATGATGATAGCTCCGATGATAGGAGAAATTCACACATGGTTGAAAAACCTGTGAAAGATTCTGAGAACTTGGATGAAAATGATGAAGAAGTTGAGGAAAAATCCTCCAGAATTCTTGAGGAAAGACCTAGAACTTCAGCTACACTAAAAGTACAAATTGCGACATCAAAAAAAATATGTGTTAGAAACTTGTCATATAGTGTGGAGCGGGCTGATATGGAAAATCTGTTCAAAGAGTGTGGAGAAATTGTTGATGTCCGTTTCATTACAGACAGTGAGGGGAGGTTTAAAGGCTTTGGGTATATTTTGTTTGCAACAGAAGAAGCAGCTCTGAAAGCCCTCGAGTTGGATAATACAGAATTGTTAAGACACCCCATTAGAATTGTTCTAGCTCGGGAAAGGAGTAAATATACTCTCCGTAGCAGCAACTTCGGTGAAACATTCCAGTCGGGTGCAAGTGTTCGGTTGCACACAATATTTGTTGCAGGTTTTAATAAATCTCTCACTGAAGAGAAGATAAAAACTAGCTTGGAAGAGCATTTCAGTTCTTGTGGAGAGATTACAAGGATATCAATTCCAAAATATCCTGATTCTGTGTCTGTTAAGGGGTATGCTCACTTGGACTTCAAGGATTTTGGTAGCTACAACAAGGCTCTACAACTCAATAAAACTGAGATTGGAGGTTATTACTTATCAGTTGAAAAAGCAATGCCTCGACGTCAATATGGTGGGAGGGATGGAGGTGGGTATCAACATGGTTGGAGGGATGGAGGTGGCCGTCAATATGGTGAGAGGGATGGAGGTGGCCGTCAATATGGTGGGAGGGATGGAGGTGAGCATCAATATGGTGGGAGGAGGGATGGAGGTGGCCATCAATTTTGTGGGAGGGATGGAGGTGGCTATCGACATAATGGGAGTGATGGAGGTTGTTTTCAATATGGTTGGAGAGGGTATGGAGGTGGCCATCAATATGGTGGGAGAGATGGAGGTGGCTATCTACACCGTGGGAGGGATGGAGTTGGTCTTCAATATGGTGGGAGGTGGGGTGGAGGTGGCCATCAATATGGTGGGCGTGATGCAGGTGGTCATCAATATGGTGAGAGGGATGGAGGTGGTCGACAATATGATGGGAGGGATATCGGTGGCCAACAATATGGTGGGAGGGATATTGGTAGCCAACAATATGGTGGGAGGGATATCGGTGGCCATCAATATGGTGGGCGCGATGGAGGTGTTCGTCAATATGGTTGGAGGGATGGAGGTGGCCCTCAATATGGGGGGAACGGCAGAGGTGGCCCTCAATATGGGGGACGCGATGGAGGTGGTCATCAATATGGTGGGAGGGGGGTTGGAAGTGGGCACGGATATGGTGGGAGGGATGGAGGTGGCCGAGGCATGCGGAGTTGGGGGAGAAGTGGTGACAGTTGGAGGCAATGA 1935 0.4522 MMENSIGKSSPSVDAAIPSLQSPKQEGKREGEDDLEKLACSKKRKRDEVAEKQKNVSEIRSDDSSLYSEQDQDQKSAKNGTPENEDNPDTRSNSSEYSGGDSDEDKAVMDIDQGDNSEESDAETQKKKMKTLQCTASNSQKHDSKTVVRDTSSDISDGDDGNKDNDDDDSSDDRRNSHMVEKPVKDSENLDENDEEVEEKSSRILEERPRTSATLKVQIATSKKICVRNLSYSVERADMENLFKECGEIVDVRFITDSEGRFKGFGYILFATEEAALKALELDNTELLRHPIRIVLARERSKYTLRSSNFGETFQSGASVRLHTIFVAGFNKSLTEEKIKTSLEEHFSSCGEITRISIPKYPDSVSVKGYAHLDFKDFGSYNKALQLNKTEIGGYYLSVEKAMPRRQYGGRDGGGYQHGWRDGGGRQYGERDGGGRQYGGRDGGEHQYGGRRDGGGHQFCGRDGGGYRHNGSDGGCFQYGWRGYGGGHQYGGRDGGGYLHRGRDGVGLQYGGRWGGGGHQYGGRDAGGHQYGERDGGGRQYDGRDIGGQQYGGRDIGSQQYGGRDIGGHQYGGRDGGVRQYGWRDGGGPQYGGNGRGGPQYGGRDGGGHQYGGRGVGSGHGYGGRDGGGRGMRSWGRSGDSWRQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1151 644 MobiDBLite consensus disorder prediction 1 212 - -
Lal6g1151 644 MobiDBLite consensus disorder prediction 519 644 - -
Lal6g1151 644 MobiDBLite consensus disorder prediction 168 189 - -
Lal6g1151 644 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 114 312 - -
Lal6g1151 644 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 325 443 - -
Lal6g1151 644 MobiDBLite consensus disorder prediction 408 457 - -
Lal6g1151 644 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 114 312 - -
Lal6g1151 644 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 325 443 - -
Lal6g1151 644 MobiDBLite consensus disorder prediction 98 128 - -
Lal6g1151 644 SUPERFAMILY RNA-binding domain, RBD 222 340 IPR035979 GO:0003676
Lal6g1151 644 MobiDBLite consensus disorder prediction 143 159 - -
Lal6g1151 644 Coils Coil 35 62 - -
Lal6g1151 644 MobiDBLite consensus disorder prediction 25 69 - -
Lal6g1151 644 Gene3D - 315 465 IPR012677 -
Lal6g1151 644 MobiDBLite consensus disorder prediction 1 19 - -
Lal6g1151 644 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 225 292 IPR000504 GO:0003723
Lal6g1151 644 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 325 397 IPR000504 GO:0003723
Lal6g1151 644 SMART rrm1_1 324 400 IPR000504 GO:0003723
Lal6g1151 644 SMART rrm1_1 224 295 IPR000504 GO:0003723
Lal6g1151 644 MobiDBLite consensus disorder prediction 424 457 - -
Lal6g1151 644 MobiDBLite consensus disorder prediction 196 210 - -
Lal6g1151 644 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 323 404 IPR000504 GO:0003723
Lal6g1151 644 SUPERFAMILY RNA-binding domain, RBD 318 434 IPR035979 GO:0003676
Lal6g1151 644 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 223 299 IPR000504 GO:0003723
Lal6g1151 644 Gene3D - 149 309 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1151 Lal-Chr6 8785606 8793164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1151 225 375 Eukaryotic Initiation Factors Gene Family AT2G36660 24.503 3.77e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1151 K11294 - lang:109360902 780.4