Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1147 ATGTCTCGCCAAATGACGTCTTCTGCGTTCACTAAATCCAAGACACTCGACAATAAATATATGCTGGGAGATGAGATCGGGAAAGGGGCATATGCTCGAGTTTACAAAGCTTTAGACCTAGAGAATGGAGATTTTGTAGCAATTAAGCAAGTGTCTTTGGAGAATATTGCTCAGGAAGATCTTAGTGTTATCATGCAAGAGATTGATTTATTGAAGAACTTGAACCACAAAAACATTGTAAAATATCTTGGATCCTCAAAGACAAATGCTCACCTGCACATAGTTCTGGAATATATGGAGAATGGTTCACTTGCAGATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCTTTGGTTGCTCTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTATCTACATGAACAAGGTGTCATCCATAGAGATATTAAGGGTGCAAACATTTTAACAACTAAAGAGGCAAGTCTTCTCCATACTTTGTTTGGGATAATGTTACTCTCTTGGCATCCATTTGGGACTCTGCCCATGGGCTTTTTACTGCGTTTCTTTGTTAGACACACAGAAGGACTGGCATACTTTGTGGCATGGCTCAGTCATAGGTCTAGAAAATTTGCCTTTTATGAACTACATCTTAACCTCTGCTTTCAGGGTCTTGTCAAACTGGCTGATTTTGGTGTTGCGATAAAATTAACAGATGCTGATCTTAATACTAATTCAGTTGTTGGAACACCATATTGGATGGCCCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGTGTTCCTCCTTACTATGACCTGCAGCCTATGCCAGCTCTGTTTCGTATTGTTCGGGATGAACATCCTCCAGTTCCTGACTGCCTTTCTGCTGACATTACTGATTTTTTGCATCATTGCTTTAAGAAGGATGCAAAACAAAGGCCTGATGCTAAAATGTTGCTCTCTCATCCCTGGATTCAAAACTGTGGACGTGCCCTGCAGTCTTCTCTTCGTCATAGTGGAACCTTAAGAAGTATATACGAGGATGATTCAGCAGATGCAGAAGCTATTGTTGGTGATCATAATAGTGCTGGTCAAAGCTCTTCTACGCAGAAAGAGGATTTTGCAAAAGAATTTTCAACTGAAGCACCTAACAGAGGCAAACCAGATGAAGACAAACCTTCAGTTTCTAATAAGACAGATGATTTTCCATCTGATCCAGTTCTTACCTTTGCCATTCACGAGAAGTCATCTCAACAAACTGGTTCTAGAAGACTCTCTTCTAATTCTAACAAGGAAGTAGCTAATTCAGGGCATACAAGTAACCTTCACTTTTCAAATGCTCAAGACCATGAAGAAGCCATGATGAATGGAGAAGTGGGATATCCACAACCAATAGGAAAGGATAATTTTCTTGAAAGAAAACAGAGTTCTATAAAAAATATCAACAATCCATTTTGTTTCAGGACAAAAGATCGAGATGACGGTTCCATAAAGGCTATAAATATGCTGCCCTCGGGTGAAGGACATGGGGTTAGTAGATTTAGTGACCCTCCAGGAGATGCCTGCATAGAAGATTTATTTCACCCACTAGATAAACAGCTGGAGAAGTTAATTGTTGGGGCATCTGCATCTATATCAACTTCATATATGGATAAAGGTAATGCATCCATATATAATGGTAAAAATAATGACCTGGCCAAAGAATTGAGGGATACAATTTCTCGGAAACAAAGGGAGAAGGAGAGATATAATGAACAGGAAAACAGTGGTGGCAACCTTTTTCACCTTTTGTTGAAAGCTCTGAAAGATGATGTAATTAACATAGATGGTTCGCTCATTGATGAAAAATTTCCAGGAGAAAACCTTTTTCCCCATCAGATTGCTGAGTTCAGCAAATTAGTCGGTTCATTAAAACCAGAGGAACCAGAAGATGTAATTGTCTCTGCATGTCAGAAGCTAATCAGCATTTTTCACGAACGTCCAGAGCAGAAGATTGTGTTTGTCACCCAGCATGGTTTACTTCCTCTAACAGACTTGCTTGAAGTTCCTGCAACTTGCGTGATATGTTCTGTGCTTCAGCTGATCAATCAAATAATTAAAGATAACACCAACTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCTCTGGTAATGACTTTTGCAGGACCTGACCATACCAGGGAGATTCGTATGGAAGCAGCTTATTTTTTTCAGCACCTTTTTCAGTCAAGCTCTTTGACATTACAAATGTTCGTAGCTTGTGGTGGAATACCTGTTTTGGTGGGATTTCTTGAGTCTGACTATGCCAAGTGCAGGGAAATGGTTCATCTTGCTATTGATGGCATGTGGCAGGTCTTTAAGCTTCAGCGGTCAACCATGAGAAATGATTTTTGTCGAATAGCTGCAAAGAATGGAATACTCCTTAGGCTGATTAACACTCTATATAGCTTAAATGAGGCAACTCGACTAGCTTCAGTAAATGTTAGAGGTGAATTATTGGTTGAAAGTTCAGCTCAACCACCATGTTTTGATCCCTTGGATTCTACACAAACTTCTATAATTCATAACGACGGACTAGTAGTCTCTTCAGTAGATCAGCAAGATCTACCTAAACTGAGCCATGAAATACTTGATTATCATTTGGAACCTTCTCATGCTTCAACCTCCAATCCTGGAAGGTCAGACGGTAAAAACACCGTGGATGAAATGCTTCAATCTAGAACTGCAGAAGCCGAAATTGCATCACTGGAAAAAAATTCAAATCTACAATCCTGGGAATCCTCGGATGGTACATTAAAAGAACAAGAGAGTGTGGACCATTGGAAATCTGATCCTTCACGAGCTAATGTTGAACCTAGGCCGCAGCCTATCAGTATTTATGTGAACAGAACATCAACAAGTAGGCCTCTAAAATTGACTGAACATGAATCAAATGTGTTATCAGAAACAGGACCAACACAGAAAGAGCAAATTAGGCATCCACTTAGCTTGTTGGAGAAAGAGCTGCCATTTCGATGTTTGAGTGGTCAACTTAAGTATGGGCGTCAGTTTTCAGGGTTACTAAAACATGAAAGTGTGCTCCATTTGTTACAGAGTTCTAAAAAGAAATCAAAAAGTGAACTAGACATTTTGATGGAAGAATTTGCAGAAGTTTCCCGATGTGGAAGGGGAAATGGAAATCTTGACACCAGTTCTATGATATCCAACAAATTTGCTCCAAAGAAAGTAAGGAGTTTTGGCTCTAATCAGGGAGCTGCTTCAACATATGGGATTGTTTCTCAGACATCTTTAAGTGTACTGTCTGGTTCAGGTATCTTAAATACTAGACCAAGAAGTGCAACCTCATCGCACATGGTTTCATCATTGAATGCAGATGTTGCCAAGGAGTACCAAGAAAAAGTAGCAGATCTTATACTTGAGTTTGCACAAGCAGATACAACAGTGAAGTCTTACATGTGTATCCAAGGCTTTCTGAGTCGTCTTTTCCAGATGTTTAATGGGATGAAGCCTGCCATTCTGCTGAAGATTTTGAAGTGTGTTAATCATCTGTCTACCGATCCAAATTGCTTAGACAATCTTCAGCGTGCTGAAGCAATACGATACTTGATACCAAATCTTGAACTCAAAGAAGGGCCTCTTGTATCACAAATACATCATGAGGTCCTAAACACACTGTTCAATTTATGCAAGATAAATAAGAGGAGACAAGAACAAGCAGCTGAGAATGGGATTATTCCCCATTTGATGCAATTCATCACATCAAATTCTCCTTTGAAGCAATATGCATTGCCTCTACTGTGTGACATGGCTCATTCATCTCGTAATTCAAGGGAGCAGTTAACAGCCCATGGTTGTCTGGATGCCTATTTGAACCTTCTCGAGGATAAGGATTGGTCTGTGACAGCACTAGATTCTATTGCTGTTTGCATAGCCCATGATAATGATAATAGGAAGGTTGAACAAGCACTGCTAAAAAAGGATGCAGTTCAAAAGCTTGTGAAGTTCTTCCAGTTCTGTCCAGAGCAGTATTTTGTGCACATATTGGAGCCATTCTGGAAAATCATCACGTACATGATTCTTATTCCTTCCTCTCTTTTCTTATAA 4143 0.3963 MSRQMTSSAFTKSKTLDNKYMLGDEIGKGAYARVYKALDLENGDFVAIKQVSLENIAQEDLSVIMQEIDLLKNLNHKNIVKYLGSSKTNAHLHIVLEYMENGSLADIIKPNKFGPFPESLVALYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEASLLHTLFGIMLLSWHPFGTLPMGFLLRFFVRHTEGLAYFVAWLSHRSRKFAFYELHLNLCFQGLVKLADFGVAIKLTDADLNTNSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVRDEHPPVPDCLSADITDFLHHCFKKDAKQRPDAKMLLSHPWIQNCGRALQSSLRHSGTLRSIYEDDSADAEAIVGDHNSAGQSSSTQKEDFAKEFSTEAPNRGKPDEDKPSVSNKTDDFPSDPVLTFAIHEKSSQQTGSRRLSSNSNKEVANSGHTSNLHFSNAQDHEEAMMNGEVGYPQPIGKDNFLERKQSSIKNINNPFCFRTKDRDDGSIKAINMLPSGEGHGVSRFSDPPGDACIEDLFHPLDKQLEKLIVGASASISTSYMDKGNASIYNGKNNDLAKELRDTISRKQREKERYNEQENSGGNLFHLLLKALKDDVINIDGSLIDEKFPGENLFPHQIAEFSKLVGSLKPEEPEDVIVSACQKLISIFHERPEQKIVFVTQHGLLPLTDLLEVPATCVICSVLQLINQIIKDNTNFQENACLVGLIPLVMTFAGPDHTREIRMEAAYFFQHLFQSSSLTLQMFVACGGIPVLVGFLESDYAKCREMVHLAIDGMWQVFKLQRSTMRNDFCRIAAKNGILLRLINTLYSLNEATRLASVNVRGELLVESSAQPPCFDPLDSTQTSIIHNDGLVVSSVDQQDLPKLSHEILDYHLEPSHASTSNPGRSDGKNTVDEMLQSRTAEAEIASLEKNSNLQSWESSDGTLKEQESVDHWKSDPSRANVEPRPQPISIYVNRTSTSRPLKLTEHESNVLSETGPTQKEQIRHPLSLLEKELPFRCLSGQLKYGRQFSGLLKHESVLHLLQSSKKKSKSELDILMEEFAEVSRCGRGNGNLDTSSMISNKFAPKKVRSFGSNQGAASTYGIVSQTSLSVLSGSGILNTRPRSATSSHMVSSLNADVAKEYQEKVADLILEFAQADTTVKSYMCIQGFLSRLFQMFNGMKPAILLKILKCVNHLSTDPNCLDNLQRAEAIRYLIPNLELKEGPLVSQIHHEVLNTLFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHSSRNSREQLTAHGCLDAYLNLLEDKDWSVTALDSIAVCIAHDNDNRKVEQALLKKDAVQKLVKFFQFCPEQYFVHILEPFWKIITYMILIPSSLFL 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1147 1380 MobiDBLite consensus disorder prediction 372 451 - -
Lal6g1147 1380 ProSiteProfiles Protein kinase domain profile. 20 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1147 1380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lal6g1147 1380 Pfam Protein kinase domain 21 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1147 1380 Pfam Protein kinase domain 218 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1147 1380 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lal6g1147 1380 PANTHER MAP KINASE KINASE KINASE 2 156 - -
Lal6g1147 1380 PANTHER MAP KINASE KINASE KINASE 218 1369 - -
Lal6g1147 1380 Gene3D - 632 863 IPR011989 -
Lal6g1147 1380 Gene3D - 1113 1370 IPR011989 -
Lal6g1147 1380 SMART serkin_6 20 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g1147 1380 SUPERFAMILY ARM repeat 1140 1350 IPR016024 -
Lal6g1147 1380 Gene3D Transferase(Phosphotransferase) domain 1 213 371 - -
Lal6g1147 1380 Gene3D Transferase(Phosphotransferase) domain 1 17 169 - -
Lal6g1147 1380 SUPERFAMILY ARM repeat 643 840 IPR016024 -
Lal6g1147 1380 CDD STKc_Cdc7_like 19 337 - -
Lal6g1147 1380 MobiDBLite consensus disorder prediction 386 410 - -
Lal6g1147 1380 MobiDBLite consensus disorder prediction 945 960 - -
Lal6g1147 1380 MobiDBLite consensus disorder prediction 928 969 - -
Lal6g1147 1380 SUPERFAMILY Protein kinase-like (PK-like) 10 351 IPR011009 -
Lal6g1147 1380 MobiDBLite consensus disorder prediction 928 944 - -
Lal6g1147 1380 Coils Coil 574 601 - -
Lal6g1147 1380 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 218 1369 - -
Lal6g1147 1380 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 156 - -
Lal6g1147 1380 MobiDBLite consensus disorder prediction 423 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1147 Lal-Chr6 8729330 8751776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1147 1 1378 MAP Kinase Kinase Kinase AT3G13530 54.929 0.0 1353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lal6g1147 Pkinase 5.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1147 - - aprc:113864564 1740.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1147 6 8729330 8751776 Lal6g1147 6 8729330 8751776 ECH