Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1146 ATGAGCTCCGGAAGAGTGAGAAGTTACCGGCAAAGGAATACAGCTATGGACCTTAACCGTCTTCCTCCCGTTACCGGTGACGGACCTTCCACTCAACAACAAGTTTCCATGATTGATTTAGATTCCATTCATGATAATTTTGATGATGATGTTCTTGAATCTTCACCTACAACTTTTGCTCAGGCTAAAGTCAATTCCAGGAGAAATCGTAGGAGGATTATAGTAGATGTGGATTTAGAAGACCAGACTGGCGTGACTAATAATATTAGAAATAGACGCAGAAGAGGTTCCCCGAACCAAACAATTATAAATTGTGATCATTATGTAAATTTGGAAGATAGTAGCAGTTCTGCGAAAGAAAATGCTAGAAAGTCATCCGAAACTCCTAAGGATCCTGTCTTTAACTGTCCAATATGTATGGGACCTTTGACAGAACCAGTTTCAACAAAATGTGGTCATATTTTTTGCAACAATTGCATTAGAGCTGCAATAACTGTACAAGCTAAATGCCCTACCTGTAGAAAAAAGATTGCAGTGAGAGAGCTTATAAGGGTGTTTCTTCCATCAACTAGTTGA 576 0.3906 MSSGRVRSYRQRNTAMDLNRLPPVTGDGPSTQQQVSMIDLDSIHDNFDDDVLESSPTTFAQAKVNSRRNRRRIIVDVDLEDQTGVTNNIRNRRRRGSPNQTIINCDHYVNLEDSSSSAKENARKSSETPKDPVFNCPICMGPLTEPVSTKCGHIFCNNCIRAAITVQAKCPTCRKKIAVRELIRVFLPSTS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1146 191 MobiDBLite consensus disorder prediction 1 15 - -
Lal6g1146 191 MobiDBLite consensus disorder prediction 1 31 - -
Lal6g1146 191 SUPERFAMILY RING/U-box 135 179 - -
Lal6g1146 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 190 IPR013083 -
Lal6g1146 191 PANTHER ELFLESS, ISOFORM B 4 191 - -
Lal6g1146 191 SMART ring_2 136 173 IPR001841 -
Lal6g1146 191 Pfam Zinc finger, C3HC4 type (RING finger) 135 173 - -
Lal6g1146 191 ProSiteProfiles Zinc finger RING-type profile. 136 174 IPR001841 -
Lal6g1146 191 ProSitePatterns Zinc finger RING-type signature. 151 160 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1146 Lal-Chr6 8720119 8725519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1146 7 190 C3H Transcription Factor Family AT5G48655 45.960 2.71e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1146 K22651 - jre:109013825 209.149