Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1145 ATGTCTGAATCAAATGCAGTAGCAAATGGTTTAGCTGGTGCAGGTGGTGGTATTATTGCTCAAATCCTAACTTATCCTCTTCAAACTGTAAACACACGCCAACAAACAGAGAGAACACTCAAGAGGAACAATAACCAAAGTTTGCTACTTCAATCTTCTTCTAACAAAACAACCACTGTTCCTGCTCCTGGCACTTTTCTTCAGATTCTTCATGTCATTGGAAGTGAGGGTTGGGGTGGACTATATAGTGGTCTTAAGCCTTCTCTTCTTGGAACTGCTGCATCTCAGGGCATTTACTACTACTTCTATCAAGTTTTTAAGAACAGGGCTGTGGCCATTGCAGCCGCGCGGAAAGTCAAGGGGCGAGGGGATGGCACTGTTGGAATGTTTGGTTGGATCATTGTGGCTGCTATGGCTGGGTCCTTGAATGTATTGCTAACAATTCCAATATGGGTTCTAGTGACTCGTATGCAGACACATACTCAAGCAGAAAGAAAAATCATGGAGGAAAAGAAAGAAGCTCTTAGGAGAGAAGCTTCTGAAAGTAGCATAGCAGGCTCAACATTACAAGACAAAGTGGCAGAATTGGAGTCTATAAAACCTCAACCTTTTGGAACTATTCATGCAGCTAATGAAGTCTACAATGAAGCGGGTGTTTTCGGATTTTGGAAGGGTGTCATCCCGGCTCTTATTATGGTATGCAATCCATCAATCCAGTTTATGATTTATGAGAGTTCATTGAAGCACCTAAGGGCAAAACGCACGGCTAAGAAGCAAGGGAATCAAAGTATATCTGCTTTGGAGGTCTTTTTGCTGGGAGCATTAGCAAAACTCGGAGCGACTGTATCAACATACCCCTTACTTGTTGTCAAGTCAAGGCTTCAAGCAAAACAGGAAATTGGTGGAAGTAACTCATATAGATACTCAGGTACCATCGACGCGATACTTAAAATGATCCGTTACGAAGGATTGCCCGGCTTTTATAAGGGAATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCTTCTGTTCTATTTATGGTTAAGGAGGAGCTTGTTAAGTTTTTCACTGTTTTAACAGACAAGAGCAGAAAAGCTCTATTGAAAAAAAAAGTGATTATTTGA 1125 0.416 MSESNAVANGLAGAGGGIIAQILTYPLQTVNTRQQTERTLKRNNNQSLLLQSSSNKTTTVPAPGTFLQILHVIGSEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNRAVAIAAARKVKGRGDGTVGMFGWIIVAAMAGSLNVLLTIPIWVLVTRMQTHTQAERKIMEEKKEALRREASESSIAGSTLQDKVAELESIKPQPFGTIHAANEVYNEAGVFGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRTAKKQGNQSISALEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGSNSYRYSGTIDAILKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKFFTVLTDKSRKALLKKKVII 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1145 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 249 IPR018108 -
Lal6g1145 374 Gene3D Mitochondrial carrier domain 189 370 IPR023395 -
Lal6g1145 374 Coils Coil 158 178 - -
Lal6g1145 374 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 370 IPR044712 GO:0006862|GO:0055085
Lal6g1145 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 264 355 IPR018108 -
Lal6g1145 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 109 IPR018108 -
Lal6g1145 374 Gene3D Mitochondrial carrier domain 1 188 IPR023395 -
Lal6g1145 374 SUPERFAMILY Mitochondrial carrier 5 351 IPR023395 -
Lal6g1145 374 Pfam Mitochondrial carrier protein 127 251 IPR018108 -
Lal6g1145 374 Pfam Mitochondrial carrier protein 263 356 IPR018108 -
Lal6g1145 374 Pfam Mitochondrial carrier protein 4 108 IPR018108 -
Lal6g1145 374 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1145 Lal-Chr6 8713900 8719179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1145 71 373 Chloroplast and Mitochondria Gene Families AT1G25380 26.266 1.06e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1145 K13354 - gmx:100775304 587.03