Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1137 ATGTCTTCCCGTTGCAATAGTTTCTATAAAATAATCCTCACAAAATGTCTTGATGATGGAAATCTTATGATTCCAAACAATTTCACACGGAGATTTGGTGCTGTTCTTCCAAACCCATTACTTTTTAAGCCTCCAGATGGCACTGAATGGAAGGTATATTGGATTAAGAATGATAGTAAGATTTGGTTTCAAAAGGGTTGGAAAGATTTTGCTACATATTACTCTCTGGATTATGGGCATTTGCTGGTGTTTGAATATCATGAATCTTCTCATTTTGAGGTACATATATTTGACATGAGTGCCCTTGAAGTAGAATATCCTTTTCATAACCAGATTAGTAATGTTGAGTCAGTTGAAAATTTGAATGATGAATCTCCACTGAAGAAGAAAAGACTGAAGTTACCCATGACATCTCTTCATTTGCCTAAGACTAAAGTTGCGTTTACTGCAATTGTGAAAGTTGCGGAAAGATGCAGCCATGATTGCGATCACGATGCAGTTGTGGAGACTTCGAAACTTCAATATTTCGGCAGAAATTGTGATGGGAAGTCAACTCAATGTACTTCACTGTTGATTAGTCCCTGTCCTATGACAAATGGAAATTTAGAAGATGCTAAGAAATTCGCATCAGAAAATCCGTTTCTCACGATCAATATAAAGCCGAGTTACCTTGACGGAAACCATCCGAATTTATCGTCCGTGTTCGCCAGAAGGTATTTTACAAAGAGGAAGCAGAATGTGATGATAAAGTTTGGAAATAAGTTTTGGTCTCTAAAGGTGATATGCTATTTGTCAAGAAGTGCCTCATTCTGCAAAGTAACAATTGATGAGATACAAAACACTTATAAGTCTTCAACTTCAACATCTATGACTTCCAGTTGCAATCTTTTCTATAAAATTATTCCCAGAAAATACATTGAAGATGGAAATCTTAAGATCCCAAACAAATTCACAAGGAAATATGGTGTTGGGTTGTCAAACCCAGTGCTTCTCAAGCCTCCAGATGGCACAGAATGGAAAGTATATTGGACTAAACATGTTGCTGATATTTGGTTTCAAAAGGGTTGGAAAGAATTTGCTACATATTACTCTCTAGATTATGGGCATTTGCTATTGTTTAAATATGAGGAAACTTCTCATTTCAATGTACACATATTTGACATGAGTACACTTGAAATAAACTATCCTTTCCATTGCACTCAACATGAAAAGAACAATCTTGAACATATTATTGATGATTCTGTTGAAATCTTTGATGATCTAGCTCCATGCAAGAAGACTAGACTAAAATCACCAATGTCATTTCCTCAACCATATAAGAAACTGAGAATTGACACAAGAGGTGTTGAAAGAAGCTCCAATTTAGAAAAATTGCACCTCAGTGTTGAAACTAAAGGTAGTCATTCTCAGAGGACACACTTTGAGAAATCACCATTTGCTTATGCTGGGAAAGAACCAAATTGTACTTCATCACAAGAATCAATTGAAGTAGATGGGGTCAATTGCTTGGAACATGGGAGAATTCCAGTTACTGAAGGTAAGATTAATCTTACTAGCAAAGGTGAGAAGGAAACTCAAAAAACTTCACTTCCTATGAGTCCCCACCCACACATAACTGGAGCTCTTAAAGAAGCTATGAGATTCACCTCAGAAAATCCCTTCTTCATGGTAGATATAGTACAAGGTTATTTGGGACAAAACAGACCGTGTGTACCAGTTGACTTCACCAGAAAGTACTTCAATAAGAAGAAGCAGAATGTGACAATACAACTTGGAAAGAAATTGTGGCCTATAAAGTTGTTGTGTTATCCATACAATACTTCAAGCAAGTTGTCTAGTGGTTGGTCCCTATTTGTAGAAGAAAGTAAATTGCAAGCTAAAGATATTTGTATTTTTGAGCTAATCAATAGAGAAGATGCAATCTTTGATGTTCATATTTTCAGAGATGGCTCATATCCATGA 1962 0.3603 MSSRCNSFYKIILTKCLDDGNLMIPNNFTRRFGAVLPNPLLFKPPDGTEWKVYWIKNDSKIWFQKGWKDFATYYSLDYGHLLVFEYHESSHFEVHIFDMSALEVEYPFHNQISNVESVENLNDESPLKKKRLKLPMTSLHLPKTKVAFTAIVKVAERCSHDCDHDAVVETSKLQYFGRNCDGKSTQCTSLLISPCPMTNGNLEDAKKFASENPFLTINIKPSYLDGNHPNLSSVFARRYFTKRKQNVMIKFGNKFWSLKVICYLSRSASFCKVTIDEIQNTYKSSTSTSMTSSCNLFYKIIPRKYIEDGNLKIPNKFTRKYGVGLSNPVLLKPPDGTEWKVYWTKHVADIWFQKGWKEFATYYSLDYGHLLLFKYEETSHFNVHIFDMSTLEINYPFHCTQHEKNNLEHIIDDSVEIFDDLAPCKKTRLKSPMSFPQPYKKLRIDTRGVERSSNLEKLHLSVETKGSHSQRTHFEKSPFAYAGKEPNCTSSQESIEVDGVNCLEHGRIPVTEGKINLTSKGEKETQKTSLPMSPHPHITGALKEAMRFTSENPFFMVDIVQGYLGQNRPCVPVDFTRKYFNKKKQNVTIQLGKKLWPIKLLCYPYNTSSKLSSGWSLFVEESKLQAKDICIFELINREDAIFDVHIFRDGSYP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1137 653 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 3 266 - -
Lal6g1137 653 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 290 649 - -
Lal6g1137 653 SUPERFAMILY DNA-binding pseudobarrel domain 3 100 IPR015300 -
Lal6g1137 653 PANTHER B3 DOMAIN-CONTAINING 290 649 - -
Lal6g1137 653 PANTHER B3 DOMAIN-CONTAINING 3 266 - -
Lal6g1137 653 ProSiteProfiles B3 DNA-binding domain profile. 296 389 IPR003340 GO:0003677
Lal6g1137 653 SMART B3_2 297 389 IPR003340 GO:0003677
Lal6g1137 653 SMART B3_2 8 100 IPR003340 GO:0003677
Lal6g1137 653 SMART B3_2 555 650 IPR003340 GO:0003677
Lal6g1137 653 SUPERFAMILY DNA-binding pseudobarrel domain 291 389 IPR015300 -
Lal6g1137 653 CDD B3_DNA 311 387 IPR003340 GO:0003677
Lal6g1137 653 Gene3D - 2 101 IPR015300 -
Lal6g1137 653 Gene3D - 289 390 IPR015300 -
Lal6g1137 653 ProSiteProfiles B3 DNA-binding domain profile. 554 650 IPR003340 GO:0003677
Lal6g1137 653 CDD B3_DNA 563 648 IPR003340 GO:0003677
Lal6g1137 653 SUPERFAMILY DNA-binding pseudobarrel domain 548 648 IPR015300 -
Lal6g1137 653 CDD B3_DNA 7 98 IPR003340 GO:0003677
Lal6g1137 653 Pfam B3 DNA binding domain 563 648 IPR003340 GO:0003677
Lal6g1137 653 Pfam B3 DNA binding domain 18 98 IPR003340 GO:0003677
Lal6g1137 653 Pfam B3 DNA binding domain 301 387 IPR003340 GO:0003677
Lal6g1137 653 Gene3D - 197 274 IPR015300 -
Lal6g1137 653 Gene3D - 538 651 IPR015300 -
Lal6g1137 653 ProSiteProfiles B3 DNA-binding domain profile. 7 100 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1137 Lal-Chr6 8635977 8644569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1137 296 648 B3 DNA Binding Superfamily AT3G18990 29.213 1.43e-34 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lal6g1137 B3 4.2e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1137 - - lang:109359484 668.307