Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1129 ATGGCTAGTTATGGAAGGGAAGGTGTGGTGAGGCAATATGTTAGATCGAAGGTCCCTCGTTTAAGATGGACTCCTGAACTTCACCGTTGCTTTGTTTATGCCATTCAGATTCTTGGAGGTCATCATAAGGCTACCCCAAAGCTTGTTCTTCAGTTGATGAATGTTAAAGGTCTCACAATTTCACACGTCAAGAGCCATCTGCAGATGTATAGAAGCATGAGAGGTGATGCATGCAGACAAGATAGAATTTCCTTCCAACATAGAAAACAATCTTTTATGGAGCATGATGTTGATGATGGGTGGGTTGAAGAAGTTAATGATGTTGGTGTTAACTCTTGTTTTAAAAGGGCTAGAACAGAGCCAAATCATCACACCTTTTATCAATATTTGAGGCTCAAGGTTGAGCAGAAGGGAATAAGAGAGATTTGTGGTGATTCTATATGGAAATCTCATGCCACAATAACATGTCCTGTGATACCATATTGTGATGAAAACCTCAATTCATTCAAATGTACAAAGCAAGGATCTGAATTACTCCAGGTTACAAAGTTAAATGATAGACATTCCTTGAATCACGTGAATGGGAACACTACAAGGGTTCATGCAAAAGACAATGATGTTGAAGGTCACAAACTTTCATTGTCAATCTCATTGACCCAACCTTCCTCTCAGAAAAGTAATGTTTCTTCAGGCAGTGAGATAAGTGAGGCAATCATTTCATCATGCCCTGGGTCTAGCAACTACAAGGGATGCTTTAGTTCATCCACTGTTCAAAATATAATTAATTTAGACCTATCTCTGGCCATATGTGGCAATTGA 819 0.3919 MASYGREGVVRQYVRSKVPRLRWTPELHRCFVYAIQILGGHHKATPKLVLQLMNVKGLTISHVKSHLQMYRSMRGDACRQDRISFQHRKQSFMEHDVDDGWVEEVNDVGVNSCFKRARTEPNHHTFYQYLRLKVEQKGIREICGDSIWKSHATITCPVIPYCDENLNSFKCTKQGSELLQVTKLNDRHSLNHVNGNTTRVHAKDNDVEGHKLSLSISLTQPSSQKSNVSSGSEISEAIISSCPGSSNYKGCFSSSTVQNIINLDLSLAICGN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1129 272 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Lal6g1129 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 116 IPR044848 GO:0003700
Lal6g1129 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 130 272 IPR044848 GO:0003700
Lal6g1129 272 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Lal6g1129 272 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 130 272 - -
Lal6g1129 272 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 2 116 - -
Lal6g1129 272 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Lal6g1129 272 Gene3D - 18 74 - -
Lal6g1129 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1129 Lal-Chr6 8443532 8446957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1129 8 74 G2-like Transcription Factor Family AT1G14600 77.612 1.60e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal6g1129 Myb_DNA-binding 2.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1129 - - lang:109360173 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1129 6 8443532 8446957 Lal6g1129 6 8443532 8446957 ECH