Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1114 ATGGCTTATCCTTGTTCTAACAAGGCCTTAGGTTGCTTTTTATTATTTTCTGTTATTATTTCTTCCCTTTCAACCATTTCCTATGCTCATTTTAGGTTCCATGATGAAGAAGGTACTTATTCAAGAAAACATTTTGCATTTGGTGATGTTACTCACCAAGTTGTAGATGATGGTTCATTTGCACCACAACCTGAGGCTGAAACTTTTGGTGTTTATCCTCCCACAACACTCCCTGAATTTGCTGATATTGCACCACAACCCGAGGCTGAAAAGTTTGGTGCTGATCCTCCAAGAGTTGGAAATGATGGTAATAATGAAACTAAGATTGTTTCCAATGATAGGCTAAAAAATGCCTATGTTGCTCTTCAAGCATTGAAAGAGTCTATCTACTCTGACCCTTTTAATACAACCGGTAACTGGATTGGTGAGGATGTTTGTTCCTACAATGGTGTGTTTTGTGCTGAAGCTCTTGATGATCCTAAGTTGAATGTTGTAGCTGGTATTGATCTTAATGATGCAGACATTGCTGGGCACCTTCCAGAAGAGTTAGGCCTATTGAAAGATGTTGCACTTTTCCACATTAACTCCAATAGGTTTTGTGGAATTATCCCAGATAGCTTTGAGAATCTCACTCTTATGCATGAGTTTGATGTTAGCAACAACCGTTTTGTTGGTGTTTTTCCTTCTGTAGTCCTCAAATGGAAAAACTTGAAGTATTTGGATATCAGATACAATGACTTTGAAGGATGTTTACCTTCAGAGCTATTTGAGAAAGATCTTGATGCAATATTCTTGAACAGCAACCGTTTCACATGCACTATCCCAGAAACTCTAGGGAAATCTAATGCATCAGTTGTGGTATTTGCTAACAACAATTTAACAGGTTGCATTCCAAAATCAATTGGAAACATGAAGAACTTGAATGAGGTTGTTTTCTTAGGCAATAGCCTCGGAGGTTGCTTTCCACAAGAGATTGGATTGCTTGAAAACTTAAATCTTTTGGACATTAGCAATAATGGGCTTGTTGGGACTTTGCCAAACTTAGCAAGTTTGAAGAATGTGGAAGTCATAGACATTGCACATAACAAGCTAAGTGGATATGTGTCTAACAATATTTGTGAGCTACCTTTGTTGTCCAATTTCACAATCTCTTACAACTATTTCAATGGAGAAGCTCAAACTTGTTTACCATCTTCCAAATCAAATCTTGCTTTTGATGACTCCAATAATTGTTTACCAGGAAGGAAGAATCAAAAGAAATATAAGGATTGTTTACCTGTGCTTACTCGCCCTGTAGATTGTAAGAAGCAATGTGGTGGTGGTAATGTCCCTTCAACACCAAAGCCAACTCCATCACCTACACCAAAGGCTGAGCCACCACCAACACCAAAAATTGAATCACCTCCAACACCAAAGAGAAATCCATCTCCATTTCTCCCACCAACATTGCCACCTGTAGAGGATATTCCACCATCAGTTTCACCATTGTCACCTCCTCCTTTAATTGTTCAACCACCTCCTACACTTGTTCTCTCTCCACCACCTCTAGTCCACTCTTCTCCACCACCACCAGTCCATTCTCCTCCACCACCAGTGCACTCTCCCCCCCCACCAGTCTACTCTCCACCACCACCACCAGTCCACTCTCCTCCACCCCCTGTCCAATCTCCACCACCACCAGTGCGCTCTTCTCCACCCCCTGTCCATTCTCCACCACCACCAGTTCACTCTCCTCCACCCCCTGTCTCATCACCACCACCACCACCAGTCTACTCTCCACCTCCACCAGTCCACTCTCCTCCACCCCCTGTCTCCTCACCACCACCACCAGTCCACTCTCCTCCACCCTCTGTGTCATCACCACCTCCACCAGTTCACTATCCTCCACCACCAGTCCATTCTCCACCACCACCAGTCCACTTTCCACCACCACCAACCTCAGTGTACTCACCGTCACCACCAGTCCACTCTCCATCACCACCACCAGTCCATTCCCCACCTCCATCACCAGTGCCAACATGGGACGACAACATCATCTTACCACCAATATTTGGATCTGAATATCGATCACCTCCTCCACCATCAATTGTTGGATACTAA 2100 0.4357 MAYPCSNKALGCFLLFSVIISSLSTISYAHFRFHDEEGTYSRKHFAFGDVTHQVVDDGSFAPQPEAETFGVYPPTTLPEFADIAPQPEAEKFGADPPRVGNDGNNETKIVSNDRLKNAYVALQALKESIYSDPFNTTGNWIGEDVCSYNGVFCAEALDDPKLNVVAGIDLNDADIAGHLPEELGLLKDVALFHINSNRFCGIIPDSFENLTLMHEFDVSNNRFVGVFPSVVLKWKNLKYLDIRYNDFEGCLPSELFEKDLDAIFLNSNRFTCTIPETLGKSNASVVVFANNNLTGCIPKSIGNMKNLNEVVFLGNSLGGCFPQEIGLLENLNLLDISNNGLVGTLPNLASLKNVEVIDIAHNKLSGYVSNNICELPLLSNFTISYNYFNGEAQTCLPSSKSNLAFDDSNNCLPGRKNQKKYKDCLPVLTRPVDCKKQCGGGNVPSTPKPTPSPTPKAEPPPTPKIESPPTPKRNPSPFLPPTLPPVEDIPPSVSPLSPPPLIVQPPPTLVLSPPPLVHSSPPPPVHSPPPPVHSPPPPVYSPPPPPVHSPPPPVQSPPPPVRSSPPPVHSPPPPVHSPPPPVSSPPPPPVYSPPPPVHSPPPPVSSPPPPVHSPPPSVSSPPPPVHYPPPPVHSPPPPVHFPPPPTSVYSPSPPVHSPSPPPVHSPPPSPVPTWDDNIILPPIFGSEYRSPPPPSIVGY 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1114 699 MobiDBLite consensus disorder prediction 435 699 - -
Lal6g1114 699 MobiDBLite consensus disorder prediction 446 675 - -
Lal6g1114 699 PRINTS Proline rich extensin signature 444 460 - -
Lal6g1114 699 PRINTS Proline rich extensin signature 466 478 - -
Lal6g1114 699 PRINTS Proline rich extensin signature 479 500 - -
Lal6g1114 699 PRINTS Proline rich extensin signature 500 516 - -
Lal6g1114 699 PRINTS Proline rich extensin signature 520 537 - -
Lal6g1114 699 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 577 694 - -
Lal6g1114 699 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 9 472 - -
Lal6g1114 699 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 577 694 - -
Lal6g1114 699 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 472 - -
Lal6g1114 699 ProSiteProfiles Leucine-rich repeat profile. 330 352 IPR001611 GO:0005515
Lal6g1114 699 SUPERFAMILY L domain-like 120 412 - -
Lal6g1114 699 Gene3D Ribonuclease Inhibitor 117 416 IPR032675 -
Lal6g1114 699 Pfam Leucine rich repeat N-terminal domain 119 153 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1114 Lal-Chr6 8237657 8239756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1114 111 537 Trihelix Transcription Factor Family AT2G15880 57.576 2.04e-162 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1114 - - lang:109330687 729.939