Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1095 ATGTTTCTTCATTGGTGTCTCATTCTCTTGGTGGGTTTAGGAGTAGAGCTTGGTAATGCTCAATATTACAGAAAAGTTGGAAATAAATTTCTCCCTTATAAGACAATTTTTGTGGATCCATTAGGGCATGGAAATTTCTCTACAATACAATCTGCTATTGATTCAGTGCCTTCAAACAATGTGAATTGGATTTCCATTAGGGTTAAAGCAGGTACCTACAGGGAAAAAGTGATTATTCCTTATGATAAACCATACATCATACTAAAAGGAGCAGGAAAAAGGAAAACTTTTGTTGAATGGGATGATCATGATTCAACTTTTCAAAGCCCTACGTTTGCAACCATAGCTGATAATATTGTAGTCAAATGCATGAGCTTCAGGAATTCATACAACAATCCAATAAATAATAAACCAAAGGTGCCTGCAGTAGCTGCTATGGTAATTGGTGACAAGTCTTACTTTTATAGGGTTGGTTTCTTTGGTTTGCAAGACACTTTGTGGGATGTCCAAGGAAGACATTACTATAAACTTTGTACCATACAAGGTGCTATTGATTTTATCTTTGGTGCAGGTCAATCTTTGTTTGAGAGATGTTCCATAAATGTTATTGCTGGTGCTTTAGAACGAGGCCTTTCTGGTTTTATCACAGCCCAAGGGAGAGTAAATTCAACAGGATCAGATGGATTTGTTTTCAACAATTGCCATGTGTTTGGAAATGGAACAACATATTTGGGAAGACCATGGAGAAATTACTCTAGAGTCCTTTTCTATAATACCAATATGACTAACATTGTTCAACCACTTGGTTGGGATCCATGGAGTTTTGCTGGTTATGAGGATCGTATAACATTTTCAGAGTATGAGAACTTTGGACCAGGTTCTAACACAAGCATGCGAGTGAGTTGGACTAAGAAGTTGGATTTGAAAACAATTAGAATGATGGCAAGTACGAAGTTCATTGACAATGACAATGAAAAATGGCTTCAATACCAAACGCAATTCTAA 1005 0.3662 MFLHWCLILLVGLGVELGNAQYYRKVGNKFLPYKTIFVDPLGHGNFSTIQSAIDSVPSNNVNWISIRVKAGTYREKVIIPYDKPYIILKGAGKRKTFVEWDDHDSTFQSPTFATIADNIVVKCMSFRNSYNNPINNKPKVPAVAAMVIGDKSYFYRVGFFGLQDTLWDVQGRHYYKLCTIQGAIDFIFGAGQSLFERCSINVIAGALERGLSGFITAQGRVNSTGSDGFVFNNCHVFGNGTTYLGRPWRNYSRVLFYNTNMTNIVQPLGWDPWSFAGYEDRITFSEYENFGPGSNTSMRVSWTKKLDLKTIRMMASTKFIDNDNEKWLQYQTQF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1095 334 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 332 - -
Lal6g1095 334 SUPERFAMILY Pectin lyase-like 33 322 IPR011050 -
Lal6g1095 334 Gene3D - 32 333 IPR012334 -
Lal6g1095 334 PANTHER PECTINESTERASE 10-RELATED 11 332 - -
Lal6g1095 334 Pfam Pectinesterase 38 322 IPR000070 GO:0030599|GO:0042545
Lal6g1095 334 ProSitePatterns Pectinesterase signature 2. 180 189 IPR033131 -
Lal6g1095 334 ProSitePatterns Pectinesterase signature 1. 60 79 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1095 Lal-Chr6 8097694 8102717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1095 8 279 Carbohydrate Esterase AT2G19150 43.590 2.97e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1095 - - gmx:100819252 512.301