Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1025 ATGCCTTCTGAAGAACCTGAATGCTACTTCAACCATGCTGTAGTTAAGCATAAGAAGAAGAGGGGATGGAAGAATTTCAACTTTGAGGCTGCAAATTTTGAAGCAAATCGTAATTTCCTTCCCAAGTTTAAGGTTACCATGACACCATCATATGTTTCAGAAAGGAGCATGGCAATACCATCAAAGTTTGTGAAAGATTATTTGAAAATGAAGGAAGCACCAGTCTTTCTTAAGGTATTGGGTGAGGAATCAACTTGGCAAGTTAAGTACAAAACTTGGACAGGAAATAGCAAAAGGAAATACAAAATTCAAGATGGTTGGCATAAGTTTACAACAGAAAATCACCTGAAAGTCGGCGATACGTGCGAGTTTATTTGGACTAATACCACCCCCATCAAATTCACAGTTGTTATTGATCGAGCCGCGAAGAAACTTAGTTGTTCAAAACCAGAAGGTAAAACTTCCTCTGATGAGCTTCTGAAGAAGTTTCTTGTTTCTCATGCAGACATGCACTCAAGTATTCAAAAATTCCCTGAGAACTTGAGACAATTTCTCTACTCCAATCTGGTTGAACTAATAATGATGCTGAAGTCTTTGCCCATCTATGAACTGCAGCTGAAGCATAAGGATACTATTTTCGGGCATCTCGCTACATTTCGACACTGTTCCCTTTCAAATGTTTGGTTGGATGAGGTTGAAGCTTGCATCAACCAGCCACTGCATGTTGTTGACACTCACAGGTTTCAAGCATTGAGAGACTTGGAACTTCAGTATTCTAAGAGTAATGAAATTCTCAAGAGGGAAATTTCTTCTATGTCTTCTCTTTTGGAAGTTGGCAAGGCTAATCTTTTGGATGTTATCACTCAGAAACAGAATCTGTTGAGTGGTTCTTCTTCATACAATGCATTCTTTCCTTTAAACATTTAA 927 0.384 MPSEEPECYFNHAVVKHKKKRGWKNFNFEAANFEANRNFLPKFKVTMTPSYVSERSMAIPSKFVKDYLKMKEAPVFLKVLGEESTWQVKYKTWTGNSKRKYKIQDGWHKFTTENHLKVGDTCEFIWTNTTPIKFTVVIDRAAKKLSCSKPEGKTSSDELLKKFLVSHADMHSSIQKFPENLRQFLYSNLVELIMMLKSLPIYELQLKHKDTIFGHLATFRHCSLSNVWLDEVEACINQPLHVVDTHRFQALRDLELQYSKSNEILKREISSMSSLLEVGKANLLDVITQKQNLLSGSSSYNAFFPLNI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1025 308 ProSiteProfiles B3 DNA-binding domain profile. 42 142 IPR003340 GO:0003677
Lal6g1025 308 PANTHER B3 DOMAIN-CONTAINING 34 141 - -
Lal6g1025 308 CDD B3_DNA 41 140 IPR003340 GO:0003677
Lal6g1025 308 SUPERFAMILY DNA-binding pseudobarrel domain 41 138 IPR015300 -
Lal6g1025 308 Gene3D - 23 144 IPR015300 -
Lal6g1025 308 SMART B3_2 43 138 IPR003340 GO:0003677
Lal6g1025 308 Pfam B3 DNA binding domain 43 137 IPR003340 GO:0003677
Lal6g1025 308 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 34 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g1025 41 124 B3 DNA Binding Superfamily AT3G18990 36.471 1.25e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lal6g1025 B3 4.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1025 - - lang:109343667 261.536