Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0997 ATGGAACAAGATTGGGATCTCTATGCGGTGGTTAGAGGCTGCTCCACCACTACCTCCACCACCATCACCACCGCAACCTCCTCCTCTGTTTCCTCTTCTAGTTTTGGTAATAATTGTTATAAACCTTCAGCATCTTCTTCATGTGGTTTCTTCTCTATTAACCCTATAAGTGAAAACCAATCATGTCAAAGTTTGTCTCTTTCAAACCCCTTTGAAGCAAAGAGTTCTTCTATTGAAGAATTGCATGAGCTTTGTAAGCCTTTCATTCTTAAATCACCATCACCTTATTCTTTTCAACCCTCTTCTCCTCTTTCTTCTTTCTCTTATTCTTCTTCTTCGCCCAAATCAACTCATACACAGAAAAAACAAAAGCCTCGTCATCATCATGCTGGTTCTGCCACCACCCCAAGATCTAAAATTAGGAAGAATCAGCTTAAGAAAGTTTGTGAAGTAGCAGCTGAGAATCTCTCCTCAGATATATGGGCATGGAGAAAATATGGGCAAAAACCAATTAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGCAGCTCAAAAGGGTGCTTTGCAAGGAAACAAGTGGAAAGGAACAAATCTGAGCCATCAATGTTCATAGTAACCTACACTGGGGAGCACAGCCACCCTGCTCCAACTCATAGAAACTCTCTTGCTGGCTCCACTAGGCAAAAGCCACTCACACCACAAGCAGCCACTGGTGAAGAATCTGACAGAATGTGTGCAAAAATCACTTCTCCTGAAACCTCAGAGGCAGAAGAAGAGGCTGAATTTGCACACCAGAGTGTGACAAAGTCAGAGAGCAAAGAGGATATGGAAGACTTGATGAATGATGATGAGGAAGAAAATGAATTTGGGTTGCCAGATATGGTGCTGAGTGATGATTTCTTTGAAGGTTTAGATGAACTCACAGGGCCTATTGCAGAAGCACCTCCTAGTGGAGTATGCTTTGATGATCCATTTCCAGCTAGTGTTGCTCTTCCTACTTGA 1008 0.4236 MEQDWDLYAVVRGCSTTTSTTITTATSSSVSSSSFGNNCYKPSASSSCGFFSINPISENQSCQSLSLSNPFEAKSSSIEELHELCKPFILKSPSPYSFQPSSPLSSFSYSSSSPKSTHTQKKQKPRHHHAGSATTPRSKIRKNQLKKVCEVAAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCFARKQVERNKSEPSMFIVTYTGEHSHPAPTHRNSLAGSTRQKPLTPQAATGEESDRMCAKITSPETSEAEEEAEFAHQSVTKSESKEDMEDLMNDDEEENEFGLPDMVLSDDFFEGLDELTGPIAEAPPSGVCFDDPFPASVALPT 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0997 335 MobiDBLite consensus disorder prediction 254 278 - -
Lal6g0997 335 MobiDBLite consensus disorder prediction 211 285 - -
Lal6g0997 335 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0997 335 MobiDBLite consensus disorder prediction 215 237 - -
Lal6g0997 335 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g0997 335 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 334 - -
Lal6g0997 335 MobiDBLite consensus disorder prediction 108 143 - -
Lal6g0997 335 Gene3D WRKY domain 141 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g0997 335 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 334 IPR044810 GO:0003700
Lal6g0997 335 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0997 335 MobiDBLite consensus disorder prediction 119 135 - -
Lal6g0997 335 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0997 Lal-Chr6 7112653 7114535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0997 1 309 WRKY Transcription Factor Family AT4G01250 45.597 4.05e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal6g0997 WRKY 3.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0997 K13425 - gmx:100170675 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0997 6 7112653 7114535 Lal2g0952 2 6378966 6380798 ECH
Lal6g0997 6 7112653 7114535 Lal9g0840 9 6133025 6134809 ECH
Lal6g0997 6 7112653 7114535 Lal6g0997 6 7112653 7114535 ECH
Lal16g1186 16 8155791 8157557 Lal6g0997 6 7112653 7114535 ECH
Lal6g0997 6 7112653 7114535 Lal22g0891 22 6973640 6975543 LSH
Lal6g0997 6 7112653 7114535 Lal6g0997 6 7112653 7114535 PCT
Lal6g0997 6 7112653 7114535 Lal22g0891 22 6973640 6975543 PCT
Lal22g0891 22 6973640 6975543 Lal6g0997 6 7112653 7114535 PCT