Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0988 ATGTCTGTTATTGAGTCAACTGAGCATAACATCAGAGGGGTAGTCACTCATGGTGGACGTTATGTTCAGTACAATATTTATGGTAACCTTTTTGAGGTTTCCACAAAGTATGTTCCTCCTATTCGCCCTGTTGGTAGAGGTGCTAATGGTATTGTTTGGGTGGCTGATGTGGCTGCAATTGTGAGAAATGATTGTGGAAACGGCGAAAACTGCAATATTGTGGCCGCAGACGACAATTTTAGAACCTTTGATGCATCTTGTGTTTTTGGAACACCTTTTGCTGCTGTTAATGCGGAGACACATGAGGAAGTTGCCATTAAGAAGGTTGGTAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATAAAACTTCTTCGGCACATGGATCATGAAAATGTGATGTCCATTAAAGATATTATACGACCTCCACAGAAGGAGAATTTCAATGATGTGTATATTATTTCTGAGTTAATGGACACGGATCTGCATCAAATAATACGTTCCAATCAACCATTGACTGATGATCATTGTCGGTTGTTACGAGGGCTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTACTGAATGCCAATTGTGACCTTAAGATTGCAGACTTCGGTCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTTACTCGATGGTATCGTGCCCCAGAATTGCTTCTTAATTGTTCAGAATACACGGCAGCCATTGATATATGGTCTGTTGGTTGCATACTTGGTGAAATCATGACAAGACAACCCCTATTTCCTGGAAGAGATTATGTTCATCAGCTGAGACTGATCACAGAGAATGACAATTTCACTGCTTTCCAAAAGCTGATAGGTTCACCTGATGACACCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGGTACGTAATGCAGCTTCCACAATATCAGAAGCAAAACTTTTGCACTAGATTTCCCGACATGTCTCCAGGTGCTATTGATTTGCTAGAGAAGATGCTTGTCTTTGATCCAAACAGGCGGATTACAGTCGAGCAGGCTTTGTGCCACCCTTACATGGCGCCACTCCACGATATCAATGAAGAACCTGTTTGCTCCAGACCTTTCAGTTTTGACTTCGAACAACCATCATTCACTGAAGAAGATATAAAGGAACTCATTTGGAGAGAGTCTGTGAGGTTCAATCCTGATCCACCAATTTACTGA 1251 0.4117 MSVIESTEHNIRGVVTHGGRYVQYNIYGNLFEVSTKYVPPIRPVGRGANGIVWVADVAAIVRNDCGNGENCNIVAADDNFRTFDASCVFGTPFAAVNAETHEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNDVYIISELMDTDLHQIIRSNQPLTDDHCRLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGRDYVHQLRLITENDNFTAFQKLIGSPDDTSLGFLRSDNARRYVMQLPQYQKQNFCTRFPDMSPGAIDLLEKMLVFDPNRRITVEQALCHPYMAPLHDINEEPVCSRPFSFDFEQPSFTEEDIKELIWRESVRFNPDPPIY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0988 416 SUPERFAMILY Protein kinase-like (PK-like) 89 375 IPR011009 -
Lal6g0988 416 Gene3D Transferase(Phosphotransferase) domain 1 162 395 - -
Lal6g0988 416 SMART serkin_6 83 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0988 416 Gene3D Phosphorylase Kinase; domain 1 14 73 - -
Lal6g0988 416 Gene3D Phosphorylase Kinase; domain 1 91 405 - -
Lal6g0988 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Lal6g0988 416 ProSitePatterns MAP kinase signature. 113 211 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal6g0988 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 88 415 - -
Lal6g0988 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 63 - -
Lal6g0988 416 Pfam Protein kinase domain 89 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0988 416 ProSiteProfiles Protein kinase domain profile. 38 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0988 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 88 415 - -
Lal6g0988 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0988 Lal-Chr6 7022311 7029218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0988 12 411 MAP Kinase Gene Family AT4G01370 74.568 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal6g0988 Pkinase 1.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0988 K20600 - gmx:100786554 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0988 6 7022311 7029218 Lal22g0878 22 6826391 6832035 LSH