Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0975 ATGCTTCATTATCACCTCATCTTCATTCTCCTCCTTACACTTACTACCAAACACTCTCATTCAACTTCCACTATCCTCTTAACTTCAAACACTACACTCTTCAGCGACAACAAAACCTTTGAACTTGGTTTCTTCAACTTTACCCCAACATCCAAACACTACTACCTCGCTATCCGCTACGCTTCTCTTCCAACACCTTTGTACACATGGCTTGGTAATCGTCAAAATCCCCTTTCTACCCTTTCCTATTCCTCTCTCCAATTAACTCAAACTGGTCGGTTAATTTTAACTGACTCTTCAACTTCTTTCCAGATCAACACCAACACCGACAACAATAATAATGACTTTTCCGGTTATACCCTTAGGTTGTTAGAAAACGGAAACCTACTTCTTCTGACGCAAAACGGCACCGTTTCGTGGCAGAGTTTTGATTACCCAACGGATACGTGGCTTCCTGGTATGAACCTCACGCGCTCTCGATCTTTACTCTCTTGGCGCACCAAAACCGATCCTTCTCCGGGTTTCTATTCTCTGCGGCTCAGACCACCGGATTACGGTGAGTTCGAGCTTGTTTTCAATAACACTGAATCGTTCTGGTCAACCGGTAACTGGACCGGCCAGTCATTCCTTAACGTTCCTGAAATGACTATTCCTTATATTTACCGGTTCGATTTTGAGGACCCGTTTTCGCCTTCTGCGTCTTTTGGGTTCTCGGAGCGGGCTTTGGAGAATGGGTTGGAACCGCCAACGCTTTTTCGGGTTGAAGCGTTTGGGCAGGTTCGGCAGTACACGTGGTCGAAGGAGTCTCGTTCTTGGAACATGTTTTGGTCCAAACCTGAGAAAATTCGTCAGGTTCGGGGCTTGTGTGGGAGGTTCGGTGTTTGCAGCAGCGACGAGACCGCGATTTTTTGTGATTGTGTTAGAGGTTATGAGCCTGTGGATGTTGAGGGTTGGAGTAATGGTGAGTATTTTGGTGGTTGTAAGCGTGAGGATGGTGAAATTTGTAATGTGAGTGATGGTTTTCATGATCTAGGTTTTGCTGTGAAGTTTGATATGTTTAATGTTAGCTCTTTGAGGACGAAAACTAGAAAATTTTGTGAGCGTGAGTGTTTCAATTCTTGTAATTGTGTTGGGTTGTCTTACAATGAAGGGAGTGGTATTTGTAGGAATTTTTATGGGTCACTTTTCGATTTTCAAAATTCGACTAATTCTAGTGACGGGGTTTTGTATGTTAGAGTTCCAAAAGAAAACAAGGGATTGTTTAATGGTAAAGTTTTGATTGCTCTCGTTATTGGGTCGGCTTTGGTTTTGGGTGTGCTGGTGGTGACATTGTTGGTTTTGATCAAGAAGAGACTGAAGAAGAAGGGGAATGAGGAAGATGTATTTATTCCTATCTTGAACTTGCAGGTGTTTAGTTACAAAGAGCTTCAGTTGGCGACACGAGGGTTTTCCGATAAGGTTGGACATGGTGGTTTTGGGACAGTGTTTCTAGGGGAATTAAGTGATTCTAGTCTTGTTGCTGTGAAGCGATTGGAGAGGCCAGGTGGTGGGGAGAAAGAGTTCAGGGCAGAAGTGTCCACAATTGGGAATATTCAGCATGTTAATCTCGTGGTACTTAGAGGGTTTTGCTCTGAGAATTCTCATAGGCTTTTGGTTTATGAGTACATGCAAAATGGTGCCCTCAGTGCTTATCTGCGGAAAGAAGGGCCTAGTTTGAGCTGGGATGTTAGGTTCCGGGTAGCAATTGGAACAGCTAAAGGCATAGCATATTTACATGAGGAATGTAGGTATCATATTATCCACTGTGATATCAAGCCTGAAAACATACTTCTGGACACTGATTTCACTGCGAAAGTTTCGGATTTTGGATTAGCAAGGCTCATTTGCAGGGACTTCAGTAGGGTGTTGGCAACTATGAGGGGCACGTGGGGATATGTTGCTCCGGAGTGGATTTCTGGCGTGGAAATTACCACAAAAGCTGATGTCTACAGCTACGGAATGACGTTGCTAGAACTAATCAGTGGTCGTCGGAATGTGGTGGCGCCACCATCTACTGTTGGAGGAGAGAATAATGGTTGTGAGACAGGAGAGAAATGGTTTTTTCCTCCATGGGCTGCACAGCAGATAATCGAGGGTAACATGACTGCTGTTTTTGACAAGAGGCTCGGAAATGTATATAACACTGAAGAGGCTAGGAGGGTTGCATTGGTGGCAGTTTGGTGCATTCAGGATGATGAGACAGTGAGACCTACAATGAGTATGGTGGTGAAAATGTTAGAAGGGTTAGTGGAACTGAATGTTCCTCCGCCGCCGAAGTTGCTACAAGCATTGGTTACCGGAGAGTCCTTTCATGGGGTCAAAGGTGATGATTCTGAGACTGGAATATCCACTGGTGGAAGCTTATCTGTTACCAACTTAGAAGTGTCAATTGCTGATTCAGAGTCATATATAGGGGATATTTTGGATGCCAATGTGAATGTTAGATAG 2487 0.4415 MLHYHLIFILLLTLTTKHSHSTSTILLTSNTTLFSDNKTFELGFFNFTPTSKHYYLAIRYASLPTPLYTWLGNRQNPLSTLSYSSLQLTQTGRLILTDSSTSFQINTNTDNNNNDFSGYTLRLLENGNLLLLTQNGTVSWQSFDYPTDTWLPGMNLTRSRSLLSWRTKTDPSPGFYSLRLRPPDYGEFELVFNNTESFWSTGNWTGQSFLNVPEMTIPYIYRFDFEDPFSPSASFGFSERALENGLEPPTLFRVEAFGQVRQYTWSKESRSWNMFWSKPEKIRQVRGLCGRFGVCSSDETAIFCDCVRGYEPVDVEGWSNGEYFGGCKREDGEICNVSDGFHDLGFAVKFDMFNVSSLRTKTRKFCERECFNSCNCVGLSYNEGSGICRNFYGSLFDFQNSTNSSDGVLYVRVPKENKGLFNGKVLIALVIGSALVLGVLVVTLLVLIKKRLKKKGNEEDVFIPILNLQVFSYKELQLATRGFSDKVGHGGFGTVFLGELSDSSLVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVVLRGFCSENSHRLLVYEYMQNGALSAYLRKEGPSLSWDVRFRVAIGTAKGIAYLHEECRYHIIHCDIKPENILLDTDFTAKVSDFGLARLICRDFSRVLATMRGTWGYVAPEWISGVEITTKADVYSYGMTLLELISGRRNVVAPPSTVGGENNGCETGEKWFFPPWAAQQIIEGNMTAVFDKRLGNVYNTEEARRVALVAVWCIQDDETVRPTMSMVVKMLEGLVELNVPPPPKLLQALVTGESFHGVKGDDSETGISTGGSLSVTNLEVSIADSESYIGDILDANVNVR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0975 828 Gene3D - 17 143 IPR036426 -
Lal6g0975 828 Pfam D-mannose binding lectin 69 160 IPR001480 -
Lal6g0975 828 ProSiteProfiles Protein kinase domain profile. 481 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0975 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Lal6g0975 828 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 8 819 - -
Lal6g0975 828 ProSitePatterns Protein kinases ATP-binding region signature. 487 509 IPR017441 GO:0005524
Lal6g0975 828 Pfam S-locus glycoprotein domain 199 312 IPR000858 GO:0048544
Lal6g0975 828 SMART serkin_6 481 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0975 828 SMART blect_4 24 146 IPR001480 -
Lal6g0975 828 PIRSF SRK 1 814 IPR024171 GO:0004674
Lal6g0975 828 Gene3D Transferase(Phosphotransferase) domain 1 556 767 - -
Lal6g0975 828 Gene3D Phosphorylase Kinase; domain 1 446 555 - -
Lal6g0975 828 ProSiteProfiles Bulb-type lectin domain profile. 18 144 IPR001480 -
Lal6g0975 828 CDD STKc_IRAK 487 762 - -
Lal6g0975 828 ProSiteProfiles PAN/Apple domain profile. 335 414 IPR003609 -
Lal6g0975 828 Pfam Protein kinase domain 485 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0975 828 Pfam PAN-like domain 335 397 IPR003609 -
Lal6g0975 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 204 IPR036426 -
Lal6g0975 828 SUPERFAMILY Protein kinase-like (PK-like) 459 760 IPR011009 -
Lal6g0975 828 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 8 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0975 Lal-Chr6 6930714 6933200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0975 471 769 Receptor kinase-like Gene Family AT5G20050 46.474 1.01e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lal6g0975 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0975 - - lja:Lj0g3v0252549.1 1132.09