Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0921 ATGAGTTTTGGAGGTTTTTTAGACAATAACAGTGGTGGTGTGAGAAACTTATCAGATATTGCATATAACAACGGTACCACTACAAATAACAACTACAGCAATAGAATAATGCCCTCTAGTGCAATCTCACACCCTCCCTTCATGACTCCAACTATGGCCAAATCCATGTTCAACTCTCCTGGGTTGTCTCTTGCACTTCAAACTAATATAGAAGGGCAAGGAGATCATGATGTGAATAGATCGATGGGTGAGAATAATAGTAATCATAATTTTGAGGTAAATGGTTTGAGAAGGAGCAGAGAAGAACATGAAAGTAGATCTGGTAGTGATAACATGGATGGTGTTTCTGGTGATGAACAAGATGCTGCCGACAAACCTCCAAGGAAAAAACGTTATCACCGACACACTCCTCAGCAAATTCAAGAACTTGAATCGTTGTTTAAGGAGTGTCCACACCCAGATGAGAAACAAAGGCTAGAACTAAGTAAAAGGCTATGCTTGGAAACAAGGCAAGTGAAGTTTTGGTTCCAAAATCGAAGAACCCAAATGAAGACACAATTGGAGCGCCATGAGAACTCACTGCTTAGGCAAGAGAATGATAAGCTTAGAGCTGAGAACATGTCAATTAGGGAAGCTATGAGGAACCCAATGTGTTCAAATTGTGGGGGACCAGCCATTATTGGTGACATTTCATTAGAGGAACAACATCTTTGGATTGAGAATGCAAGGTTGAAAGATGAACTAGACCGTGCTTGTGTGCTCGCGGGCAAGTTTTTAGGCCGACCAATATCTTCATTGACTAACTCAATTTCTCCTCAATTGCCAAGTTCAAGTTTAGAACTTGGAGTTGGTGTCAATAGTAATGGCTTTGGTGGAATGAGCACTGTGCCTTCAGCATTACCTTTGGGGTCTGATTTCGGAATCGCGGGCATGTCTAGTAGCCCTTTGGCCATAGTGTCTCATTCAACTAGACCAACAACGGGCACTTCGGTAAGTGGCTTTGACCGATCAATGGAAAGGTCTATGTTATTGGAGCTTGCTTTGTCTGCAATGGATGAGTTGGTGAAGCTAGCACAAACTGGTGAACCTCTTTGGATAAGTAGTTTAGAAGGAGGGAGGGAAATTCTTAACCATGAGGAATATTTGAGGACTTTCACCCCTTGCATTGGCTTAAGACCCAATGGTTTTGTCTCTGAGGCTTCTAGAGAGACTGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAGACTCTAATGGACTCGAATCCATGGGCGGAGATGTTTTCTTCTATAATTGCTACAACCTCTACCACTGAAGTGATATCTAATGGAATTAATGGAACCAGAAATGGTGCACTTCAACTGATGAATGCGGAGCTTCAAGTCCTTTCACCTATGGTTCCGGTCCGGGAGGTGAATTTCCTCCGGTTTTGCAAGCAGCACGCCGAAGGCATATGGGCTGTGGTGGATGTGTCTGTAGACACCATCCGTGAAACTTCCGGTGCACCGATTTTTCCGAACTGTAGGAGGCTTCCTTCCGGTTGTGTTGTGCAAGATATGCCAAATGGTTACTCCAAGGTTACATGGGTGGAACATGCAGAATATGAGGAAAGTCAGGTCCACGAACTCTATCGGTCCTTGTTGAGTTCAGGCATGGGCTTCGGCGCGCAACGCTGGGTCGCCACCCTACAACGCCAATCCGAGTGCCTCGCCATCCTTATGTCCTCCGCAACACTCCCGCGAGACCACTCGGCTATAACAGCGGGTGGAAGACGTAGCATGTTAAAGCTAGCACAACGCATGACAAAGAACTTCTGTGCTGGAGTTTGCGCATCAACGGTTCATAAATGGAACAAACTGAACCCAGGGAACGTGGACGAGGACGTGAGAGTCATGACACGGAAGAGCGTGGACGATCCCGGTGAGCCACCGGGTGTTGTGCTTAGCGCAGCCACTTCTGTGTGGCTTCCTGTTTCATCTCAGAGATTATTCGATTTCTTACGTGACGAGAGGCTTAGAAGCGAATGGGATATACTCTCCAATGGTGGTCCTATGCAGGAAATGGCTCACATTGCTAAAGGTCAAGACCATGCCAATTGCGTTTCTCTCCTACGAGCCAGCGCTATGAATTCTAACCAGAGTAGCATGCTGATACTTCAAGAGACATCCATAGACGCAGCTGGTTCGCTTGTGGTTTACGCGCCGGTTGATATTCCGGCAATGCACGTCGTCATGAACGGCGGTGACTCAGCTTACGTGGCATTACTACCGTCAGGGTTTGCCATTGTCCCTGACGGGCCGCATAACGGTGGAGCCAATAGAAACAGCGGTGATAACGGTAGTGAGGCCAGTGTAAGTGGGTCCCTTCTAACGGTGGCGTTTCAAATCCTTGTTAATAGTCTTCCGACGGCTAAGCTCACCGTAGAATCAGTGGAGACAGTAAACAACTTAATCTCGTGCACCGTTCAGAAGATCAAAGCTGCGCTTCAGTGTGAAAGTTGA 2502 0.464 MSFGGFLDNNSGGVRNLSDIAYNNGTTTNNNYSNRIMPSSAISHPPFMTPTMAKSMFNSPGLSLALQTNIEGQGDHDVNRSMGENNSNHNFEVNGLRRSREEHESRSGSDNMDGVSGDEQDAADKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIREAMRNPMCSNCGGPAIIGDISLEEQHLWIENARLKDELDRACVLAGKFLGRPISSLTNSISPQLPSSSLELGVGVNSNGFGGMSTVPSALPLGSDFGIAGMSSSPLAIVSHSTRPTTGTSVSGFDRSMERSMLLELALSAMDELVKLAQTGEPLWISSLEGGREILNHEEYLRTFTPCIGLRPNGFVSEASRETGMVIINSLALVETLMDSNPWAEMFSSIIATTSTTEVISNGINGTRNGALQLMNAELQVLSPMVPVREVNFLRFCKQHAEGIWAVVDVSVDTIRETSGAPIFPNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHELYRSLLSSGMGFGAQRWVATLQRQSECLAILMSSATLPRDHSAITAGGRRSMLKLAQRMTKNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSSQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASAMNSNQSSMLILQETSIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPHNGGANRNSGDNGSEASVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0921 833 SUPERFAMILY Bet v1-like 337 569 - -
Lal6g0921 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 89 830 - -
Lal6g0921 833 MobiDBLite consensus disorder prediction 94 109 - -
Lal6g0921 833 ProSiteProfiles 'Homeobox' domain profile. 126 186 IPR001356 GO:0003677
Lal6g0921 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 89 830 IPR042160 -
Lal6g0921 833 SUPERFAMILY Bet v1-like 597 826 - -
Lal6g0921 833 SMART START_1 345 569 IPR002913 GO:0008289
Lal6g0921 833 Coils Coil 180 215 - -
Lal6g0921 833 ProSitePatterns 'Homeobox' domain signature. 161 184 IPR017970 GO:0000981|GO:0006355
Lal6g0921 833 SUPERFAMILY Homeodomain-like 112 186 IPR009057 -
Lal6g0921 833 CDD START_ArGLABRA2_like 340 568 - -
Lal6g0921 833 ProSiteProfiles START domain profile. 336 572 IPR002913 GO:0008289
Lal6g0921 833 MobiDBLite consensus disorder prediction 73 93 - -
Lal6g0921 833 Gene3D - 115 202 - -
Lal6g0921 833 CDD homeodomain 128 186 IPR001356 GO:0003677
Lal6g0921 833 MobiDBLite consensus disorder prediction 73 136 - -
Lal6g0921 833 Pfam START domain 345 568 IPR002913 GO:0008289
Lal6g0921 833 Pfam Homeodomain 129 184 IPR001356 GO:0003677
Lal6g0921 833 SMART HOX_1 127 190 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0921 Lal-Chr6 6401996 6409519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0921 1 833 Homeobox Transcription Factor Family AT3G61150 64.218 0.0 1027
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal6g0921 START 6.1e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0921 K09338 - gmx:100787537 1306.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0921 6 6401996 6409519 Lal6g0921 6 6401996 6409519 ECH