Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0905 ATGGACCACAATCATGGATCTTCATCTCCATACAATTATCCAAATCCATATTACCCTCAAAACCCTCATCCTCCTCCCCAATATGGTCATGATCCATATGCTAACCTTCCTCAACAATATCCATATAACCATCCTTCACCACATCCCTTCAATTATCCCTACCCTCCACCACCTCAACCATGCTTTTCAGCCCCACATTCTGGCCCTATAAATTATCCCTACCCTCCACCTCCTCCACCACCTTCCTCAGCCCATAATACTGCCTCATTCGACTTTAACCGACCGCCTCCATCGTCAGACTTTTTGGGCCCTCATCCTTATCCTTTCCCCTACCAAGCTCCTCCAGATAGTCATGGTCATCCTCAGCCTCAGCCTCAGCCTCAGCCTCGGGCTCCGTTTTCATTTCATACCGGTTTTGAGTATGGATCGTCGTCTCCTTACAATTACCAACAGAATGAGGCCTATTCGCAGTCTGGACAGTACTCACAAACGCATAGTGTCGCTGGTCCCTACCAGCAGGAGAACATGAGCTCTCAGGGATCTGCTTACCCGCCTTTACATGATCTTATGAGCAATGTTCGGTTATCGGACAATAACCAGCCAACTGCTCCTGCATCACCCCCTGCGCCTGCCGCGCACCCATTGCTACATTCCAATTCAGTTACAAAGGAAGAGAAACCATGGGGGCATTCCAATTCAGTGCCAACAGAAGAGAGGAACCATGACTTTTATGGTTATTCTAATAACTCCTTCTCGGGTTGGGGATCCTCCCCTCACTCTGATCCGGGGAATTCTCCAAATATTTCAGATTATTCTGGTTCATTTAATGACTCGGTGCATAATCAGAGTTTGCAGATAGTCCCAGTTCAAAATAATGCGTCGTCTTTAAGAGTTTTGCTCCTACATGGAAATTTGGATATATGGGTTCATGGAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACTTTGGGGGAAATGTTTGGTAGAAGACCTGCTAATTCGAGCACTAAAGTAGAAGGAACAGTGAGTCATAAGATTACTAGTGATCCTTATGTAACAATTTCTATATCAAATGCTGTAATTGGGAGGACTTTTGTGATTAGCAACAATGAAAACCCTGTCTGGGAGCAACATTTCTATGTTTATGTTGCACATTATGCTGCTGAATTGCACTTTGTTGTCAAGGACAGTGATGTCGTGGGTTCACAGATTATTGGTGTTGTGGCAATTCCGGTGGAACAGATATACTCCGGGGAAAGAGTAGAAGGGACCTACCCGATCCTGAATAATAACGGGAAGCCTTGTAAGCCAGGTGCTGTTTTGAATCTATCCATTCAGTACATTCCAATGGAGAAACTGATCATTTATCATCAAGGAGTCGGAGCAGGGCCTGACTATATTGGGGTTCCCGGCACATATTTTCCGTTGAGGAAAGGTGGGACTGTTACTCTCTACCAAGATGCCCATGTTCCAGATGGCTGCCTCCCTGACGTGATGCTTGATAATGGGATGCATTATGTTCATGGAAAATGCTGGGTTGACATCTTTGATGCCATACAGGAAGCTCGGCGTTTGATTTATATTACAGGTTGGTCAGTGTGGCACAGAGTCAGGTTGCTTAGGGATGCCCGTAATGCATCAGATTCCACCCTAGGTGAACTTTTGAGGATCAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTGTTTGGGATGACCCTACATCAAGAAGCATTCTTGGTTATAGAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGCCGATTTTTCAAGCACTCTTCTGTGCAAGTTCTGCTTTGTCCTCGTGTTGCTGCAAAACGACATAGCTGGGTCAAGCAACAGGAAGTTGGAACAATATATACACACCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGACGGGCGATATGATACTCCCCACCATCCTCTCTTTAGGACATTGCAGACACTGCATAAGGATGATTATCACAACCCTACTTTCACGGGTAATGTTGGTGGCTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAGTTGATGGTCCAGCGGCTTACGATGTTTTGACCAACTTTGAGGAACGCTGGTTAAAAGCTTCAAAACTTCAAGGGGGGATAAAGAAGTTGAAAAGTTCATTTGATGATGCACTGCTTAGGATAGAAAGAATTCCAGATATTCTCAAAGTGTTTGATGCTCCTAGTGTTAGTGATGATAATCCTGAAGCTTGGCATGGTCAGATATTTCGTTCAATTGATTCAGGTTCCGTTAAGGGATTTCCAAAGGATCCCAGAGATGCATCAAGCAAGAACCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCAATTCGTGCGGCACAACATTACATTTATATAGAGAATCAATATTTCATCGGGTCTTCATTCAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTTAAGATTGCTGAAAAGATAAGGGCAAATGAGAGATTTGCAGTTTACATCGTTATTCCAATGTGGCCTGAGGGTGTTCCAACAGGGGCTGCCACCCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAATTTACAAGGCTTTGGTTGAAGTTGGGCTTGAAGCAGCATACTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGGGAGGCCGTAGATATCTATGAGAATATTGCTGTTTCTGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAACTAGTCGGAACAACCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGATCTGCTAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACCGAGATTGCAATGGGAGCCTACCAACCTCATCATACTTGGGCAAGAAAACAGTCTTATCCACATGGACAGATTCATGGATTTAGGATGTCGCTTTGGGCAGAACACACAGGTACAATTGAAGAGTGCTTCTTGCAACCGGAGAGTCTGGAATGTGTGAGAAGGGTTAGAACAATGGCTGAACTGAACTGGAAACAATTTTCAGCAAATGAGATAACAGAGATGAGAGGGCATCTACTCAAATACCCGGTGGAAGTTGATCGGAAAGGTAAAGTTAAACCCCTTCCTGGCCATGAAGAGTTCCCCGATGTCGGAGGAAGGATAGTCGGGTCATTTATCGCCATTCAGGAGAATCTAACCATATGA 3357 0.4385 MDHNHGSSSPYNYPNPYYPQNPHPPPQYGHDPYANLPQQYPYNHPSPHPFNYPYPPPPQPCFSAPHSGPINYPYPPPPPPPSSAHNTASFDFNRPPPSSDFLGPHPYPFPYQAPPDSHGHPQPQPQPQPRAPFSFHTGFEYGSSSPYNYQQNEAYSQSGQYSQTHSVAGPYQQENMSSQGSAYPPLHDLMSNVRLSDNNQPTAPASPPAPAAHPLLHSNSVTKEEKPWGHSNSVPTEERNHDFYGYSNNSFSGWGSSPHSDPGNSPNISDYSGSFNDSVHNQSLQIVPVQNNASSLRVLLLHGNLDIWVHGAKNLPNMDMFHKTLGEMFGRRPANSSTKVEGTVSHKITSDPYVTISISNAVIGRTFVISNNENPVWEQHFYVYVAHYAAELHFVVKDSDVVGSQIIGVVAIPVEQIYSGERVEGTYPILNNNGKPCKPGAVLNLSIQYIPMEKLIIYHQGVGAGPDYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPDVMLDNGMHYVHGKCWVDIFDAIQEARRLIYITGWSVWHRVRLLRDARNASDSTLGELLRIKSQEGVRVLLLVWDDPTSRSILGYRTDGVMATHDEETRRFFKHSSVQVLLCPRVAAKRHSWVKQQEVGTIYTHHQKTVIVDADAGNNKRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTLHKDDYHNPTFTGNVGGCPREPWHDLHSKVDGPAAYDVLTNFEERWLKASKLQGGIKKLKSSFDDALLRIERIPDILKVFDAPSVSDDNPEAWHGQIFRSIDSGSVKGFPKDPRDASSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEVGLEAAYSPQDYLNFFCLGNREAVDIYENIAVSGNPPPANSPQATSRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWARKQSYPHGQIHGFRMSLWAEHTGTIEECFLQPESLECVRRVRTMAELNWKQFSANEITEMRGHLLKYPVEVDRKGKVKPLPGHEEFPDVGGRIVGSFIAIQENLTI 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0905 1118 MobiDBLite consensus disorder prediction 172 242 - -
Lal6g0905 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 628 663 IPR001736 GO:0003824
Lal6g0905 1118 SMART C2_3c 304 426 IPR000008 -
Lal6g0905 1118 MobiDBLite consensus disorder prediction 15 31 - -
Lal6g0905 1118 Pfam C2 domain 303 429 IPR000008 -
Lal6g0905 1118 PANTHER PHOSPHOLIPASE D ALPHA 1 208 1118 - -
Lal6g0905 1118 Gene3D C2 domain 298 438 IPR035892 -
Lal6g0905 1118 PANTHER PHOSPHOLIPASE D 208 1118 IPR015679 -
Lal6g0905 1118 Gene3D Endonuclease Chain A 507 743 - -
Lal6g0905 1118 MobiDBLite consensus disorder prediction 219 237 - -
Lal6g0905 1118 MobiDBLite consensus disorder prediction 1 150 - -
Lal6g0905 1118 CDD C2_plant_PLD 298 450 - -
Lal6g0905 1118 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 296 453 IPR035892 -
Lal6g0905 1118 MobiDBLite consensus disorder prediction 42 84 - -
Lal6g0905 1118 Pfam Phospholipase D Active site motif 629 663 IPR001736 GO:0003824
Lal6g0905 1118 Pfam Phospholipase D Active site motif 965 991 IPR001736 GO:0003824
Lal6g0905 1118 SUPERFAMILY beta-sandwich domain of Sec23/24 95 1068 - -
Lal6g0905 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 964 991 IPR001736 GO:0003824
Lal6g0905 1118 SUPERFAMILY Phospholipase D/nuclease 498 728 - -
Lal6g0905 1118 MobiDBLite consensus disorder prediction 99 130 - -
Lal6g0905 1118 Pfam Phospholipase D C terminal 1038 1108 IPR024632 -
Lal6g0905 1118 SMART pld_4 964 991 IPR001736 GO:0003824
Lal6g0905 1118 SMART pld_4 628 663 IPR001736 GO:0003824
Lal6g0905 1118 MobiDBLite consensus disorder prediction 254 274 - -
Lal6g0905 1118 ProSiteProfiles C2 domain profile. 285 427 IPR000008 -
Lal6g0905 1118 Gene3D Endonuclease Chain A 787 1019 - -
Lal6g0905 1118 SUPERFAMILY Phospholipase D/nuclease 797 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0905 Lal-Chr6 6269127 6276474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0905 63 1118 Phospholipase D Gene Family (Wang group) AT2G42010 66.758 0.0 1446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0905 K01115 - gmx:100791059 1649.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0905 6 6269127 6276474 Lal6g0905 6 6269127 6276474 ECH