Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0904 ATGTTAATGTCATATAAGCCTAGAATGTCACTAGTAAATATGTTTATAAAGAAACTAACAAACCTATTTTCTCTTCTTTGGTTCCCATTGTTGTTGATCCTTCTGAGCAGTGCTTTAGTTAATGGTGTTGATCAAAAGAACTTTTACATTGTTTTCTTGAGAGACAATCATGTGAGTAGAGACATTGCATATGAGACACATTTAAATGTTCTATCAGCTGTTAAAGGAAGCCACCATGAAGCCGAAGAATCCATAAGATACAGCTACACGAAGAGCTTTAACGCGTTTGCTGCTAAACTTTCCGAGGATGAAGCCAACAGTTTATCTGGCATTGTAGCCATGGACGAAGTGCTTTCGGTGTTTCCAAATCAGTATCGCAAGCTACACACAACGCGATCATGGGACTTCATTGGGTTACCTTTGACTGCTAAAAGAAAATTGAAATCAGAGAGTGACACAATTGTGGCTCTTTTGGATACAGGCATCACTCCCGAGTTTCAAAGCTTCAAAGACAATGGATTTGGTCCTCCGCCCACAAAATGGAAAGGAACTTGTGATCACAAGATTATAGGAGCAAGGTACTTCAAGAATGATGGAAATCCTGATCCATCTGACATATTATCTCCCATAGATGTGGATGGCCATGGCACTCATACTGCATCAACGGCCGGAGGCAATCTGGTCCCGAATGCAAGTCTCTTCGGGCTGGCGCAAGGGACTGCTCGCGGTGCAGTGCCATCGGCCAGGTTGGCAATTTACAAAGTCTGTTGGGGAACCAATGGATGTGCAGACATGGACATACTTGCTGCATTTGAAGCCGCTATACACGATGGAGTGGATGTCATATCCATTTCCATAGGTGGAGGGAATGCAAATTATGTGCAGGACTCTATTGCAATTGGCGCATTTCATGCCATGAGGAAAGGCATAATCACTGTCGCTTCGGCTGGAAATGATGGTCCGAATATGGCTTCCGTCACGAATAATGCGCCGTGGATTGTAACAGTAGCAGCTAGTGGCATTGACAGGGATTTCAAGAGCACTATTGAGTTGGGGAGTGGAAAGAATGTTTCTGGAGCAGGAGTGAGTGCTTTCAATCCAAAACAAAAACAGTACCCTCTTATTAATGGGATTGATGCAGCCCGGAACACCGAAAACAAGGAAAATGCTAAGTTCTGCTATGAAGATTCCTTAGACCCAAAAAAGGTGAAAGGAAAGCTTGTCTACTGTAGATTAGGATCATGGGGCACTGAAGCTGTTGTGAAAGGAATTGGAGGCATTGGCACTGTACTTGAAAGTGAGCAATTTCTTGATGTTGCTCAAATTTTCATGGCTCCTGCCACTATTGTGAATAATAGCATAGGTGAAACTATAAACAATTATATACAATCCACAAGATCACCATCAGCAGTGATACATAAGAGCCATGAAGTTAAAAAGCCAGCTCCATTTGTTGCTTCATTTTCTTCCCGGGGTCCAAATCCGGGATCCCAACATGTTCTCAAGCCTGATATTACAGCTCCAGGCATTAACATATTAGCATCTTTCACACTTAAGAAGTCACTCACTGGTTTGAAAGGAGATACACAATTTTCGGAATTTACGCTAATGTCTGGTACTTCCATGTCGTGCCCTCATGTTGCTGGAGTAGCAGCATATGTGAAGTCATTTCATCCAAATTGGACTCCTGCTGCAATAAGATCTGCTATTATCACCACAGCTAAACCTATAAGCCGGAAATTTAACAAGGAAGCTGAATTTGCCTATGGTGCTGGTCAAGTAAATCCAACAAGAGCTGTGAGCCCTGGCTTAGTCTATGACATGGATGACTTAGCTTATATCCAGTTTTTGTGCCATGAGGGCTATAACGGTTCGACTTTATCCGTATTAGTCGGAACTCCTGTAAATTGTACTTCTCTGATTCCTGCATTTGGCTATGATGCTATCAACTATCCGAGCATGCAACTAAGCGCGAAAAGCGATAAAGGCAGAACAGTAGGAGTTTTTAGGAGAAGAGTGACCAATGTAGGTCCTTCTCCAACCATCTACAATGCCACTATTAAATCTCCCAAAGGAGTGAATATCACAGTGAAGCCTACTAGCCTCATATTCTCTCACACTAAGCAGAAGAAAAGCTTCACTATGGTGGTGAAAGCAAAATCTATGGAAAGCATGCAAATTTTATCAGGTTCCCTTATTTGGAAAAGTCCCCGTTACATTGTTAGGAGCCCTATTGTTATCTACAGTCCTTAA 2253 0.4234 MLMSYKPRMSLVNMFIKKLTNLFSLLWFPLLLILLSSALVNGVDQKNFYIVFLRDNHVSRDIAYETHLNVLSAVKGSHHEAEESIRYSYTKSFNAFAAKLSEDEANSLSGIVAMDEVLSVFPNQYRKLHTTRSWDFIGLPLTAKRKLKSESDTIVALLDTGITPEFQSFKDNGFGPPPTKWKGTCDHKIIGARYFKNDGNPDPSDILSPIDVDGHGTHTASTAGGNLVPNASLFGLAQGTARGAVPSARLAIYKVCWGTNGCADMDILAAFEAAIHDGVDVISISIGGGNANYVQDSIAIGAFHAMRKGIITVASAGNDGPNMASVTNNAPWIVTVAASGIDRDFKSTIELGSGKNVSGAGVSAFNPKQKQYPLINGIDAARNTENKENAKFCYEDSLDPKKVKGKLVYCRLGSWGTEAVVKGIGGIGTVLESEQFLDVAQIFMAPATIVNNSIGETINNYIQSTRSPSAVIHKSHEVKKPAPFVASFSSRGPNPGSQHVLKPDITAPGINILASFTLKKSLTGLKGDTQFSEFTLMSGTSMSCPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPISRKFNKEAEFAYGAGQVNPTRAVSPGLVYDMDDLAYIQFLCHEGYNGSTLSVLVGTPVNCTSLIPAFGYDAINYPSMQLSAKSDKGRTVGVFRRRVTNVGPSPTIYNATIKSPKGVNITVKPTSLIFSHTKQKKSFTMVVKAKSMESMQILSGSLIWKSPRYIVRSPIVIYSP 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0904 750 Pfam Fibronectin type-III domain 649 747 IPR041469 -
Lal6g0904 750 Gene3D Peptidase S8/S53 domain 152 610 IPR036852 GO:0004252|GO:0006508
Lal6g0904 750 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Lal6g0904 750 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Lal6g0904 750 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Lal6g0904 750 Gene3D - 342 478 - -
Lal6g0904 750 ProSiteProfiles Serine proteases, subtilase domain profile. 133 600 - -
Lal6g0904 750 Pfam Subtilase family 151 592 IPR000209 GO:0006508|GO:0008236
Lal6g0904 750 Pfam Peptidase inhibitor I9 49 129 IPR010259 -
Lal6g0904 750 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Lal6g0904 750 CDD Peptidases_S8_3 127 574 IPR034197 -
Lal6g0904 750 Gene3D - 617 749 - -
Lal6g0904 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 748 IPR045051 -
Lal6g0904 750 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 48 748 - -
Lal6g0904 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 37 129 IPR037045 -
Lal6g0904 750 SUPERFAMILY Subtilisin-like 128 604 IPR036852 GO:0004252|GO:0006508
Lal6g0904 750 CDD PA_subtilisin_like 348 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0904 Lal-Chr6 6265091 6268821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0904 46 573 Subtilisin-like Serine Gene Family AT4G00230 65.549 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0904 - - ccaj:109800351 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0904 6 6265091 6268821 Lal6g0904 6 6265091 6268821 ECH
Lal6g0904 6 6265091 6268821 Lal7g0002 7 16322 19688 PCT
Lal6g0904 6 6265091 6268821 Lal6g0904 6 6265091 6268821 PCT