Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0898 ATGAATACTTTATCATTAAGCTCAAACTTGAGCATTTCCAAACCATTTCACTGTCTTCCATTCTCAAACAAACAACAAAGACCTTCACATATGAAAACCATAAAGGTGAAGAGTAATGACACAAACTTGTACAACATACTTTCATTGAGTCCCAAAAGTGCAACAATGGATGATATAAAGAAATCTTATAGATCAATGGCTCTTCAACACCACCCAGATGTGTGTCATGACCCTTCTATGAAAGAGGAGTGTACGAGGATGTTTGTGAAGGTAAATGCAGCTTATGAGACATTGTCAAATCCTATGCTTAGAGAAGAATATGATTGTGAGTTGGGTTTGAGAAGAAGAATGATAAGCAATGTTGGTGTTAGTGAAGATGAGAAATGGAGAAGAAGGTGGCAACAACAAGTTGGTGGGTTGAAAATGAGGTCTCGTACACGTATGGGACAAAAGGGAGGGTCATGGGGCAATAGAATGAGGACACAAAATATGAAAAATTAG 501 0.3772 MNTLSLSSNLSISKPFHCLPFSNKQQRPSHMKTIKVKSNDTNLYNILSLSPKSATMDDIKKSYRSMALQHHPDVCHDPSMKEECTRMFVKVNAAYETLSNPMLREEYDCELGLRRRMISNVGVSEDEKWRRRWQQQVGGLKMRSRTRMGQKGGSWGNRMRTQNMKN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0898 166 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 30 166 - -
Lal6g0898 166 SMART dnaj_3 41 103 IPR001623 -
Lal6g0898 166 Pfam DnaJ domain 42 108 IPR001623 -
Lal6g0898 166 MobiDBLite consensus disorder prediction 137 166 - -
Lal6g0898 166 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 30 166 - -
Lal6g0898 166 PRINTS DnaJ domain signature 45 63 IPR001623 -
Lal6g0898 166 PRINTS DnaJ domain signature 63 78 IPR001623 -
Lal6g0898 166 PRINTS DnaJ domain signature 83 103 IPR001623 -
Lal6g0898 166 ProSitePatterns Nt-dnaJ domain signature. 88 107 IPR018253 -
Lal6g0898 166 Gene3D DnaJ domain 29 137 IPR036869 -
Lal6g0898 166 CDD DnaJ 42 100 IPR001623 -
Lal6g0898 166 SUPERFAMILY Chaperone J-domain 35 107 IPR036869 -
Lal6g0898 166 ProSiteProfiles dnaJ domain profile. 42 111 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0898 Lal-Chr6 6183498 6184019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0898 44 108 C2H2 Transcription Factor Family AT1G74250 40.299 3.07e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0898 - - gmx:100811478 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0898 6 6183498 6184019 Lal6g0898 6 6183498 6184019 ECH