Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0884 ATGGCTGAAGAGGAGAGGGACACTGAAAGAGGATCGTCAATGGATTCCACTGAATCGAGATGGGTTTTCCAGGAGGATGAGGATGAATCTGAGATAGACGAGTTTGATGCCGATTTGCCTATAGTTGATTCGGAAGATGAGGAAAATGGTGAACAGAGACTTGTTCGAACTGGCCCTCGAATTGATTCTTTTGATGTTGAAGCTCTTGAAGTCCCTGGTGCTCATAGAAATGACTATGAGGATATCAATATGGGAAAGAGAATTGTATTGATTTTTCAAACTCTTGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCATTATACACCTTTAGCGTTATGTTCAGAAAGGCCCCTATTAATGGAAATGAAGATATTCTTGGAGCATTATCACTTGTCTTATACACTTTAATCTTGATTCCTTTACTGAAGTATGTCCTGGTTGTTCTATGGGCCAATGATGACGGTGAAGGTGGTACATTTGCCTTGTACTCCTTGATTTGTCGCAATGCTAAGGCGAGCCTTCTTCCCAATCAGTTGGCATCGGATGCTCGAATATCAGGCTTCAGGCTAAAGGTTCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGGCTAGAGAATTCGCTAACTCTGAAGAAGATTCTACTATTATTAGTGCTCGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTTACACCAGCAATGTCAGTACTATCATCTGTTAATGGTTTGAAAGTTGGGGTAGATGCAATTAAGCAAGATGAAGTGGTGATGATTTCCATCGCCTTCCTTATTATTTTGTTCAGTCTACAGAAGTATGGAACAAGTAAAATGGGGCTTTTTGTAGGACCTGCTTTGTTCATATGGTTTTGTTCTCTTGCGGGCATTGGGATATACAATCTTGTCAAATATGACAGTAGTGTCTTGAGGGCATTTAATCCTATTTACATCTATTACTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGATCTGAGGCCATGTTTGCTGATCTTTGCTACTTCTCTGTTCGATCAGTCCAGCTTACATTTGTATTTCTTGTTTTGCCATGCCTAATGTTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCACGAGGATGCTGGTCAGGCCTTTTTTTCTTCTGTTCCAAGTGGTGCATTCTGGCCCACTTTGCTCATTGCTAACATTGCTGCACTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCAACTGTACTCGGTTGTTTCCCTCGCCTTAAAATAATTCACACTTCTCGGAAATTTATGGGCCATATCTATATCCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCCCTGGTGTTTGTCTGCTCTATATCCAGCATGGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACTACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATAAACATCATCATAGTGCTGAGCTTTGCGGTAGTCTTCTTGGGATTGGAGTTGGTTTTCTTTTCATCAGTTTTGTGGAGTGTGACAGATGGAAGTTGGATTATATTGGTTTTTGCCGTTATAATGTTTCTTATAATGTTCGTATGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAACGGATTTAATGCGAGAGTTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATCGGTTTACTCTATAACGAGTTGGTCAAAGGAATTCCAGGAATATTTGGTCATTTTCTGACCACACTTCCAGCAATCCACTCCATGATCATATTTGTGAGTATCAAGTATGTTCCAGTTCCCATGGTGCCTCAAAGTGAAAGGTTCCTGTTCCGGCGAGTCTGCCAGAAAAGTTACCATATATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGTCCGCAAAGAAAATCACCAGACTTTTGAACAGCTGCTTATGGAGAGTCTAGAGAAGTTTATACGTCGCGAGGCTCAGGAAAGGTCACTTGAGAGTGACGGGGATGATGATTCTAATTCAGAGGATGAGTACTCTGGTACTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTACTCACTCGGCGTTCCTCTTCTGGCTGATTTTACAGAGACAAGCATTCCCACTTTTGAAGCAAGCACATCAGAGGATGTAAACTCACAGTCTCCTAATCCCCCAGTGCTTGATGCAGAGCAAAGTCTCGAAAGGGAGTTATCTTTTATACGCAAAGCAAAAGAATCTGGAGTTGTTTATCTTGTTGGTCATGGGGATATAAGGGCAAGGAAGGACTCTTGGTTTGTCAAGAAGCTAGTTATAAACTATTTTTATGCCTTTTTGAGAAAGAACTGCAGGAGGGGAATCGCGAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACTTACATGGTCTGA 2511 0.4158 MAEEERDTERGSSMDSTESRWVFQEDEDESEIDEFDADLPIVDSEDEENGEQRLVRTGPRIDSFDVEALEVPGAHRNDYEDINMGKRIVLIFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKASLLPNQLASDARISGFRLKVPSPELERSLKIKERLENSLTLKKILLLLVLAGTSMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISIAFLIILFSLQKYGTSKMGLFVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIYIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLMLGYLGQAAYLMENHEDAGQAFFSSVPSGAFWPTLLIANIAALIASRAMTTATFSCIKQSTVLGCFPRLKIIHTSRKFMGHIYIPVINWFLLAVSLVFVCSISSMDEIGNAYGIAELGVMMMTTILVTLVMLLIWQINIIIVLSFAVVFLGLELVFFSSVLWSVTDGSWIILVFAVIMFLIMFVWNYGSKLKYETEVKQKLSTDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCQKSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSNSEDEYSGTRVLIAPNGSVYSLGVPLLADFTETSIPTFEASTSEDVNSQSPNPPVLDAEQSLERELSFIRKAKESGVVYLVGHGDIRARKDSWFVKKLVINYFYAFLRKNCRRGIANLSVPHSHLMQVGMTYMV 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0884 836 MobiDBLite consensus disorder prediction 22 45 - -
Lal6g0884 836 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 835 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal6g0884 836 PANTHER POTASSIUM TRANSPORTER 18 835 - -
Lal6g0884 836 MobiDBLite consensus disorder prediction 1 52 - -
Lal6g0884 836 TIGRFAM kup: potassium uptake protein 90 836 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal6g0884 836 Pfam K+ potassium transporter 92 664 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0884 Lal-Chr6 6091241 6099524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0884 3 836 Inorganic Solute Cotransporters AT5G09400 79.009 0.0 1323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0884 - - gmx:100803841 1438.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0792 22 5811980 5819166 Lal6g0884 6 6091241 6099524 LSH
Lal6g0884 6 6091241 6099524 Lal16g0548 16 3507766 3519991 PCT
Lal6g0884 6 6091241 6099524 Lal15g0493 15 3396644 3401513 PCT