Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0873 ATGAGTCGCAAAAGAGACAAATCCTACTTTTCCCGCCACGCCCCATACGCCGCCTATAAGCGCCGCCGCCCTCCTCCGGAACCACCTCTTGAGGTGGAGGAGGAAAAACCGACGATGAGGCCAGCTCCGCCATCCGCGCTGGTTGTTATGGGCCTTCCTCAAGACTGCTCAGTCCTTGACCTCAAGTCACGCTTCGAGATCTACGGCCCCATTGGACGCATCCGCATCGACCGTGACGCCGTCGGATACATCACTTATCGGAACAAGGAATCCGCCGATGCCGCCATCGCTGCCAGCGTCGACCCTTCCTTTGGGATCACCGTTGACTCCAAAAAGGTTCAGGTGTTATGGGCAACTGATCCTCTAGCTATGTGGAGGGAAGGAATTGGTAATAACAAGGATAAAGGGTCTATGTCAAAGCTTGTACGCGCTGAGATACCATTGAGGAAGCATGGAAGAGGTAATAGACTCGCTTCAGCTATAGGGAATACCAAAACTACCGATGATAGCTCAGGTAGCTCAGTTCTACAAGTGCCTTTCAGTGGCAGAGAAATTGTTGCTTATGATGATATCCTGTAA 579 0.5199 MSRKRDKSYFSRHAPYAAYKRRRPPPEPPLEVEEEKPTMRPAPPSALVVMGLPQDCSVLDLKSRFEIYGPIGRIRIDRDAVGYITYRNKESADAAIAASVDPSFGITVDSKKVQVLWATDPLAMWREGIGNNKDKGSMSKLVRAEIPLRKHGRGNRLASAIGNTKTTDDSSGSSVLQVPFSGREIVAYDDIL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0873 192 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 97 IPR000504 GO:0003723
Lal6g0873 192 MobiDBLite consensus disorder prediction 1 42 - -
Lal6g0873 192 SUPERFAMILY RNA-binding domain, RBD 22 128 IPR035979 GO:0003676
Lal6g0873 192 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 120 IPR000504 GO:0003723
Lal6g0873 192 MobiDBLite consensus disorder prediction 24 38 - -
Lal6g0873 192 SMART rrm1_1 46 116 IPR000504 GO:0003723
Lal6g0873 192 CDD RRM_SF 47 115 - -
Lal6g0873 192 Gene3D - 2 122 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0873 1 192 Homeobox Transcription Factor Family AT1G27050 54.634 7.76e-64 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0873 6 5989813 5991715 Lal6g0873 6 5989813 5991715 ECH