Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0872 ATGGCTCTTGGACACTTAACAACAGCCCACACAGAAGTCGGTTTTTACGAAACCGACTTATTAATTGTTTTGATGTTTGGCACACAGAAGTCGTTAAAAAACGAGGAAGAAGTAGTTTATTTTATAGCAGAACATTGGAGACATTACAAGATGGAAGAAGAACTAAACGTGAATAATGAAACACTAGAGGGATTAGATGACTGTAATGGTAGTGAAGAAGAAAATGTGAATGAAATAGAGGGGTTAGATTTTGAAGAGATTGATTTTCGATTACTAAATGAAGATGAAGTGAAAAAATATAGGTTTTTAAACAATGAAATTGCATACAAATTTTATAAGATGTATGGTATGAAGAAAGGATTTGACATTAGAAAATATAATACTCGGCGAGACAAGGATGGTGAGATTTTGTGGCAATCCTTTTTTTGTGATAGAGAAGGATTTAGAGATAAAAAAAATGATCTGATTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCACATTGACAAGGAGAAAGGAGATTGGTATGTTAGTTATTTTGTTGATGAACATAATCATGAACTCGTTGGTGAATATTATGGTGCGATGATAGTTTCTAACCGAATAATGACAGAGACAGATGTGGCTCAGATGAACACAATGAGAGAAGTGGGTATTGGGACAGGAAAGATATTTGGGTCTTTTGCTGGTCAATGTGGGGATGTTTCACTACAACTAGGACTGAATGTTAACGGTCGACATGTAACATATTTTGATTGGGATGAGATGTGTGGAGAATTATTGGGAAAAGTCCCAATAGTTGAAGAAGATATGAGGGGGTGTGAGTTAAAGTTAGCTTGGCTAGTTGATAACTTTAGTCAACTCCCCCCTAACCCTACACAAATACAATTACAACAGTATTGTAGGGCACGTATCCTATATATTATAGGAGGCGAATTGATCCCCGACAAATCCAACAGTAGAGTACATCTAATGTACTTACATTTACTTAGAGACCTATCAAGAGTTAACAGATATAGCTGGGGTTCAGCTTGTTTGGCAAACTTGTATAGGGAGATGTGTCGGGCTACTAAACCAAATGGAAAAGCCATGGGTGGGTGCTTAATACTTTTACAATCTTGGGTATGGTATAGACTACCTTTTCTTGCACCAAGATTGGATGGTCCACCAACTTATCCATTGGCTAAAAGGTGGGGTCAAACAAATTTAATCTTTCAAGGAGTTCCACGTGGAGACTTGACAGGATATAGGTCACGCTTGGATCATATGGAAGTCAACGATTTTAAATGGCTGCCATATGAGACTTATATCAACAATCTCGAACGTCAAATTCGACAAGATAAGAGGGTGTGGAGTGCATGTACAGCTTTGATTTGTTTCTCCATTATCGAATGGCATCAAACAGATCGAGTAAAACTACAGTTTGGACTTGTCCAAGATTTGCCACAACCACCGATGAATCTTGATGCCCTACACAGAGTTGACAAACGGGGTAATCAAGATGCAAACTGGGCTTCCAAACATGCACAATGGATTGAATATTGGAGTCATCGTAGGGATCAAGTCGTACGAGGACCTCAAATCCAATATCCCGTCCACACACCACAATATATGATTTGGTATAGAACTAATTCTAGACTTTTCTTATCTTCCGAAACTCAACTCCGAGACCCACGCCAAATAAATATACAAACTAACCCACATCAAACAGATCAAATTCTCACACCCCAAACACCAATGTTCCCACCTATGACGAACCAACCTATGACGTCACAACTTCCGATGATTCAACCATCAATGTCTAGCTCTTATAACCTTCAACCAGGGAGAATGTCTTTTCATTATGAACCGTCACAACACCATCAGAATCGGGTTGATGATTTGATGCCACAACGCCACTCATTTTCTACCGACCAAAGCGACTTCATCAACAATTTATTCGGTACACCTGATTCGGCAAATGTGCATCTTAATGATATTGAATTCAACTTCAATCAAGATGGTGCTGGACCAAGTTCTTTTGTAGTTAATGATAATATTTTCCCAACGGGGCTGACAGATACAACTCAAGACCAACCAATGGTTGAAAATAGAGGGAGGTCGAGACGTTCTAGGCAACCTCCTAGGTGTGGAACACGAGGTCATTTAGGGAATTTGTAA 2187 0.39 MALGHLTTAHTEVGFYETDLLIVLMFGTQKSLKNEEEVVYFIAEHWRHYKMEEELNVNNETLEGLDDCNGSEEENVNEIEGLDFEEIDFRLLNEDEVKKYRFLNNEIAYKFYKMYGMKKGFDIRKYNTRRDKDGEILWQSFFCDREGFRDKKNDLIRKRAPRKETRCGCLARMKIHIDKEKGDWYVSYFVDEHNHELVGEYYGAMIVSNRIMTETDVAQMNTMREVGIGTGKIFGSFAGQCGDVSLQLGLNVNGRHVTYFDWDEMCGELLGKVPIVEEDMRGCELKLAWLVDNFSQLPPNPTQIQLQQYCRARILYIIGGELIPDKSNSRVHLMYLHLLRDLSRVNRYSWGSACLANLYREMCRATKPNGKAMGGCLILLQSWVWYRLPFLAPRLDGPPTYPLAKRWGQTNLIFQGVPRGDLTGYRSRLDHMEVNDFKWLPYETYINNLERQIRQDKRVWSACTALICFSIIEWHQTDRVKLQFGLVQDLPQPPMNLDALHRVDKRGNQDANWASKHAQWIEYWSHRRDQVVRGPQIQYPVHTPQYMIWYRTNSRLFLSSETQLRDPRQINIQTNPHQTDQILTPQTPMFPPMTNQPMTSQLPMIQPSMSSSYNLQPGRMSFHYEPSQHHQNRVDDLMPQRHSFSTDQSDFINNLFGTPDSANVHLNDIEFNFNQDGAGPSSFVVNDNIFPTGLTDTTQDQPMVENRGRSRRSRQPPRCGTRGHLGNL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0872 728 Pfam Plant mobile domain 243 551 IPR019557 -
Lal6g0872 728 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1 243 587 - -
Lal6g0872 728 Pfam FAR1 DNA-binding domain 110 198 IPR004330 -
Lal6g0872 728 MobiDBLite consensus disorder prediction 691 728 - -
Lal6g0872 728 PANTHER PROTEIN MAIN-LIKE 2 243 587 IPR044824 GO:0010073|GO:0048507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0872 Lal-Chr6 5985285 5988022 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal6g0872 PMD 3.9e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0872 - - gsj:114415843 413.305