Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0869 ATGGGGTTGGTTGGTGGTGAGAATGTTAATAAGGTGGTGGAGTCTTGGGATGTGAGTAATTCAAAAGGGAGGAAGAAGAAGAAGAAGAAAGAGGTTGAGGTAGTGGTAGAGGAAGTTGAAGGTGCTGGATGTTGGGTTAGTATAAGGTTATTTGGGAGCTGCGTTTCTTCAAGATCCAAGGTTAATAGCTCACTCAGTGGCACAAGCACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGGCCAACCAACTGCTCCTATAGTGTCTTCTACATCCACTAGTAATACAGAAAGCAATTCATCAAGTTCAAAGCTTGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAGTTTGCTTTCAATGATCTTAAGTTGGCAACAAGAAACTTTCGGCCTGAGAGTCTTCTCGGCGAAGGTGGGTTTGGTTGTGTATTCAAGGGGTGGATAGAAGAAAATGGAACTGCTCCAGTGAAACCTGGAACAGGGCTTACTGTTGCTGTAAAAACCCTCAATCACGATGGGCTCCAGGGTCATAAAGAGTGGTTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCTTGTTAAGCTTATAGGATACTGCATTGAAGCTGATCAAAGGTTGTTAGTGTACGAGTTCATGCCTCGGGGAAGCCTCGAAAACCACTTGTTTAGGAGATCTCTGCCTCTTCCGTGGTCCATTAGGATGAAAATTGCATTTGGAGCTGCTAAGGGTCTTGCTTTTCTCCATGAAGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACATCGAATATACTATTAGATGCAGAGTACAATGCCAAACTCTCAGACTTTGGTCTTGCCAAAGATGGCCCAGAAGGTGACAAAACCCATGTGTCTACTCGAGTGATGGGAACCTATGGATATGCAGCACCAGAGTATGTTATGACGGGACATCTCACGTCAAAAAGCGATGTGTACAGTTTCGGAGTGGTACTGCTTGAGATGTTGACTGGCAGAAGATCTATGGACAAACACCGACCCAATGGCGAACATAACCTTGTGGAATGGGCTCGGACACATCAAGGAGAGAGGAGAAGGTTCTACAGGTTAATAGACCCTCGTCTGGAAGGTCACTTTTCGATAAAGGGAGCTCAGAAAGCTGCACAACTGGCTTCTCTCTGCCTTAGTAGAGATCCAAAAGCCCGACCACTAATGAGTGAAGTTGTGGAAGCTTTAAAGCCTCTGCCAAACCTAAAGGACATGGCAAGCACTTCATATTACTTCCAGACAATGCAAGCTGATCGCTTCAGAGCGAGCCCAAACGCTAGAAACGGGCGGACACAAGGAGGAGCATTGCTCACTCGGAATGGGCAGCAGCAAAGGAGCCTTTCAATACCAAATGGCACTCATGTCTCTCCATATCATAACCAATATCCCCAACAATCACCAAAACCCAATGTTAAAGCATAG 1473 0.4467 MGLVGGENVNKVVESWDVSNSKGRKKKKKKEVEVVVEEVEGAGCWVSIRLFGSCVSSRSKVNSSLSGTSTHYAESKSTNDTSRGQPTAPIVSSTSTSNTESNSSSSKLEEELKVASRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEADQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAFGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARTHQGERRRFYRLIDPRLEGHFSIKGAQKAAQLASLCLSRDPKARPLMSEVVEALKPLPNLKDMASTSYYFQTMQADRFRASPNARNGRTQGGALLTRNGQQQRSLSIPNGTHVSPYHNQYPQQSPKPNVKA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0869 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Lal6g0869 490 PANTHER OS01G0588500 PROTEIN-RELATED 64 480 - -
Lal6g0869 490 MobiDBLite consensus disorder prediction 60 105 - -
Lal6g0869 490 Gene3D Transferase(Phosphotransferase) domain 1 219 434 - -
Lal6g0869 490 MobiDBLite consensus disorder prediction 438 490 - -
Lal6g0869 490 MobiDBLite consensus disorder prediction 60 108 - -
Lal6g0869 490 SUPERFAMILY Protein kinase-like (PK-like) 119 433 IPR011009 -
Lal6g0869 490 ProSiteProfiles Protein kinase domain profile. 133 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0869 490 Pfam Protein tyrosine and serine/threonine kinase 137 413 IPR001245 GO:0004672|GO:0006468
Lal6g0869 490 ProSitePatterns Protein kinases ATP-binding region signature. 139 171 IPR017441 GO:0005524
Lal6g0869 490 CDD STKc_IRAK 139 416 - -
Lal6g0869 490 Gene3D Phosphorylase Kinase; domain 1 92 218 - -
Lal6g0869 490 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 64 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0869 Lal-Chr6 5911941 5915466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0869 80 413 Glycoside Hydrolase AT3G07070 53.412 3.09e-116 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal6g0869 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0869 - - gmx:100807510 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0869 6 5911941 5915466 Lal6g0869 6 5911941 5915466 ECH
Lal12g1455 12 17780876 17785312 Lal6g0869 6 5911941 5915466 PCT
Lal6g0869 6 5911941 5915466 Lal12g1455 12 17780876 17785312 PCT