Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0866 ATGGAAGATCATAACAATATCTCGAAGTCTAATGGTGATGAAGAGAATGGTAGCATTAAGCATCAAAAGCTTGAATCAGCAAAGGGTGAAATGGGAGAGGTTATAGAAGAAAACAAAAGGTTGAAGCTCTTATTAGCTAGGCTTGCAAATGATTACCAATCACTTCAAACAAACTTCACTGACATCCTTATTCAACAAGAAGAATCTACCAAAGCTACATGTAAAACATCAATAATTCATGAAGAAAGTGAATTTATCACCCTTTCTCTTGGGATGTCATGCACAGACCAACCATCTAAGGATGAGAAAAGGAATAGAAATAGAACTGAAAAGAGAAAATTAGATGATGAGGATTTGCATAAAGGACTTGCACTTGGGTTAGATATCAAATTTGATCCTTCAACAAATGAAGCTGAAGTTACAAATAATTCTAGCCAACAAAGAAGCTTTGAAAATGAAGAAGGGAAGGGAGAGGAATCATCTGAGATTTGGTCACATAGTAAAGTTATGAACACAATGAAAGCTGAAGATAAAAGTGAAACTTATCAACATTCTCAGCTTAAGAAGACTAGGGTTTCTATCAGAGCCAGATGTGAGACTCAAACGATGAATGATGGATGTCAATGGCGAAAATATGGACAAAAAATGGCAAAAGGAAATCCATTCCCCAGAGGTTACTATCGTTGCACTGTATCTCCATCTTGTCCAGTGAGAAAACAGGTACAAAGATGTGCTGAGGATATGTCAATCTTGATTACAACCTATGAAGGAAATCACAATCACCCACTTCCTATTTCAGCTACTGCTATGGCCTCCACAACTTCTGCAGCTGCTTCAGTGCTTCAATCTCCTTCATTGACTTCACCTAATTCAGATATAGCCTCAACCATTATCAATTCTAGTGCTACTAATTACAACCCTAATGCACTAAACTTCTCCACTCACCAAATTTCAAGACCCTATCCATTCTACTTTCCAAACTCCTCTATTTCAACCATAAATTCTCACCCTACAATCACTCTTGACATTACTGCACCACCACCAACTTCCTCAGGCTTCTCTTACATACCAAAATATTCATCATCAATTACAGGCCTTAATTTTTCTTCTGGTTTCTCTCCTCTACAATCTAGCAATATCCCACAACAATGGAGCAGTTATAGTGGTAATGGTAATTACTTCAACAATGGAACACTAACCCAAAATAGAAACCAAGGTGGTTATGTAACAAACACTGGAAAACAACCATTTCATCAAGGGCATCTACATCAACCTATTTACATGAGCAACCATATAATTTCTCAACAACAATCTGTGCCAGATTCCATTGTTGCTGCAACCAAGGAAATCACAACCAACCAAAAATTTCAATCAGCATTAACCACAGCTCTCACAACATATGTTGGCAATGGTACTAGGGCTAAAGAAAATGATGTTGCTGAGAGTGCAGATATGAATTTGAAGCTAAGTGGTGGAGATGTGTCTTTCACTTCTAGTCAAAATGGTATAGGATTTGCATCATCAAGGTACTTGAATATGCCTTCATCTCTTAACAAAGTTCAACAAGGAAACTCGGTCAATTTTCACCATCACTAG 1596 0.3741 MEDHNNISKSNGDEENGSIKHQKLESAKGEMGEVIEENKRLKLLLARLANDYQSLQTNFTDILIQQEESTKATCKTSIIHEESEFITLSLGMSCTDQPSKDEKRNRNRTEKRKLDDEDLHKGLALGLDIKFDPSTNEAEVTNNSSQQRSFENEEGKGEESSEIWSHSKVMNTMKAEDKSETYQHSQLKKTRVSIRARCETQTMNDGCQWRKYGQKMAKGNPFPRGYYRCTVSPSCPVRKQVQRCAEDMSILITTYEGNHNHPLPISATAMASTTSAAASVLQSPSLTSPNSDIASTIINSSATNYNPNALNFSTHQISRPYPFYFPNSSISTINSHPTITLDITAPPPTSSGFSYIPKYSSSITGLNFSSGFSPLQSSNIPQQWSSYSGNGNYFNNGTLTQNRNQGGYVTNTGKQPFHQGHLHQPIYMSNHIISQQQSVPDSIVAATKEITTNQKFQSALTTALTTYVGNGTRAKENDVAESADMNLKLSGGDVSFTSSQNGIGFASSRYLNMPSSLNKVQQGNSVNFHHH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0866 531 SMART WRKY_cls 203 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0866 531 MobiDBLite consensus disorder prediction 91 117 - -
Lal6g0866 531 MobiDBLite consensus disorder prediction 97 117 - -
Lal6g0866 531 MobiDBLite consensus disorder prediction 1 31 - -
Lal6g0866 531 Gene3D WRKY domain 188 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g0866 531 MobiDBLite consensus disorder prediction 132 164 - -
Lal6g0866 531 PANTHER WRKY TRANSCRIPTION FACTOR 72B 11 518 - -
Lal6g0866 531 Pfam WRKY DNA -binding domain 204 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0866 531 SUPERFAMILY WRKY DNA-binding domain 196 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal6g0866 531 Coils Coil 24 58 - -
Lal6g0866 531 ProSiteProfiles WRKY domain profile. 198 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal6g0866 531 MobiDBLite consensus disorder prediction 135 150 - -
Lal6g0866 531 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 518 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0866 Lal-Chr6 5888441 5892309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0866 31 346 WRKY Transcription Factor Family AT5G15130 43.860 7.95e-68 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal6g0866 WRKY 4.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0866 - - lang:109339108 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0866 6 5888441 5892309 Lal6g0866 6 5888441 5892309 ECH
Lal6g0866 6 5888441 5892309 Lal7g1404 7 19007474 19011516 ECH
Lal6g0866 6 5888441 5892309 Lal17g1000 17 8106561 8113683 ECH
Lal6g0866 6 5888441 5892309 Lal24g1391 24 15299874 15303641 ECH