Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0864 ATGATGGGAAAAGGAAGAAGTCCTGGGAAATGGTTCAAGAACTTACTCTCGAGGAAGAAATCATCATCAAAGTCTAAATCATCGAAGAAGGATGATATTTTGAAACCTTCGGATAACAAGGATGAGTTGCGATCTTCTGAGTTAACCGTGTCTGATCAAATTGCGGAGTCTTTGGTGATACCCCCACCAATTTCTGGAGCTAATGCTACTAAAGGAGTGCTTTCAGAGAAGGAAGTAATTACTAGTTCTTCGCATGACAATGATATTATTTCAGCTGGGGATAAAGAGGTTCATGCAAAAGCTGTTGCTAATTTTGGATCGCAGGAGGATCTTGAGAAACTCAGGCTAACAGATGTAGCTACAACAGTTCAAGCTGCTTCTAAAGGCTATCAGGTAATCGCTAACTCATCATCAAAGTCTGAATCATCGAAGAAGGATAATATTTTGAAACCTTCGGATAACAAGGATGAGCTGCAATCTTCTGACTTAACGGTATCTGATCAAATTGTGGATTCTTCGGTGATACCCTCACCAATTTCTGGAGCTAATGCTTCTAAAGGAGTGATCTCAGACAAGGAAGTAATTACTAAGTCATTACATGACAAGGATATTATTTCAGCTGAGGACGAAGAAGTTCATGCACAAGCTGTTGCTAATTTTGTATCTCAGGAGGATCTTGAGAAACTCAGGCTAACAGATGCAGCTACAACAGTTCAAGCTGCTTCTAAAGGCTACCAGAAACCTTCGGATAACAAGGATGAGCTGCGATCTTCTGACTTAACCGTGTCTGATCAAATTGCGGATTCTTTGGTGATACCCTCACCAATTTCTGGAGCTAATGCTACTAAAGGAGTGCTTTCAGAGAAGGAAGTAATTACTAGTTCATCGCATGACAGTGATATTATTTCAGCTGGGGATGAAGAGGCTCATGCACAATCTGTTGTTACTTTTGGATCTCAGGAGGATCTTGAGAAACTCAGGCTAACAGATGCAGCTACAACAGTTCAAGCTGCTTTTAGAGGCTATCAGGCTCGTGTGACATTTCAAACACACAAAGGTATCATACAACTGCAAGCTCTTATTCGTGGCCACTTGGTTAGAAGACATGCCATTTCTGCTTTATACTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGATATTGGGATTGCAGTACTGAAAATTCGTAAGGACACTAAATGTTCAAATTCTATTGGAGTAGTCACAACAACACAGTCAGAAAAGCTGTCCAATAGTGTCTTTGTTCACAAGTATCCATTACAGCTTTTGGCTTCATCATCCCTAGCAGTTCCTCTATCTCTCAGATTTGATCATGGAGACCCTAATCTGGCTAAGGAGTGGCTTTCCCGATGGACGAGGTCACACTTTTGGGCACCTCTTCCAGAACTGAATAAGAAACTTGACTCTCGGTCTAATGACAAAAATGGCAGTCGTCTAACGGTTGAAAAAGGACAAGTTAAAAGAAACACCCGGAAATCTCCTTCTGAAAAAGCTGGCGGCGGATCAGGTTCTGGTTCTAGCAAATATAAACAGCACCCCAAAAAGGATTCAAACCGTCCATTGCTTTCAGCTCAGGAACATCCACAAAAGGAAACCGAGAAAAGTAGTTCTGTTAAAACTCGAGTGGAGTCTGTTTCTGATAGATATGCGGTTGTTGATGAGAAAAGAAAACACAGCACTAGAAAAAATTTAGATCATACTGTGACTAATGTTTCAAAGCTGGGCTCAAGTGCCTCTTCAGAGAAAATGAAAGATTTGGCAGTTTCAAAAGCAAAAAATTTGGCTGTGTCAAAAGCAAAAGATTTGGCAGTGTCAAAATCAAAAGAGTCTGATACTGAGAGAAGTCTTGAACAACAAGTGGAAGACAAACATGATAATGAGCCAAACGATGATCCTTTTGATCTCTTGAAGACTAGTGCGATGAATGTTACAGATGAAGGAACAAGAGTATTTTCAGTTCATACTGACACAGAGGTTTCAAAGTTGGATCAAAGTGCCTCTTCAGAGAAAATGACAGATTTGGCAGTTTCAACCGAGAAAAGTCCCGGACAACATGTGGGAGAGCCACATGACAATGAGCCCGATGATAATGAGCCAAATGATAATTCTATGGTTCTCTTGCAGACTAGTGTGATGAATAATAGTTTAGATGAAGTAATTGAAGGAGTCAGTGAGGACTTGAGTGGTGGCGGTGGTGACGATTATCGTATCAGCAACAATTACCAAAGACGAGCTTCGCTACCTGCTAATTTTAATGATCAAGATAATGAGTCACAAAACAGTCCAATACTACCGAGCTATATGGCTCCTACCGAATCTGCAAAAGCTAGGATAAGAGCACAAGGCTCTCCAAGGTTGGCTTCTTCTTTGGTAGACAATAACAGTGTAACAAGACGGCATTCACTTTCATCGTCACTTAATGTCAACTCGGATTCATTTTCTCCTAGATCTGAAAGATTGGTTATAAGTGGCAGAGGAAGGATAAGAACTGATAGATCTCTCTCATCTTTAAGGGATGGGAATGGGACTGATAATAAGTTGATCCAACCTCGATGGAGAAGATGA 2613 0.4076 MMGKGRSPGKWFKNLLSRKKSSSKSKSSKKDDILKPSDNKDELRSSELTVSDQIAESLVIPPPISGANATKGVLSEKEVITSSSHDNDIISAGDKEVHAKAVANFGSQEDLEKLRLTDVATTVQAASKGYQVIANSSSKSESSKKDNILKPSDNKDELQSSDLTVSDQIVDSSVIPSPISGANASKGVISDKEVITKSLHDKDIISAEDEEVHAQAVANFVSQEDLEKLRLTDAATTVQAASKGYQKPSDNKDELRSSDLTVSDQIADSLVIPSPISGANATKGVLSEKEVITSSSHDSDIISAGDEEAHAQSVVTFGSQEDLEKLRLTDAATTVQAAFRGYQARVTFQTHKGIIQLQALIRGHLVRRHAISALYCVKGIVKFQALARGYNVRRSDIGIAVLKIRKDTKCSNSIGVVTTTQSEKLSNSVFVHKYPLQLLASSSLAVPLSLRFDHGDPNLAKEWLSRWTRSHFWAPLPELNKKLDSRSNDKNGSRLTVEKGQVKRNTRKSPSEKAGGGSGSGSSKYKQHPKKDSNRPLLSAQEHPQKETEKSSSVKTRVESVSDRYAVVDEKRKHSTRKNLDHTVTNVSKLGSSASSEKMKDLAVSKAKNLAVSKAKDLAVSKSKESDTERSLEQQVEDKHDNEPNDDPFDLLKTSAMNVTDEGTRVFSVHTDTEVSKLDQSASSEKMTDLAVSTEKSPGQHVGEPHDNEPDDNEPNDNSMVLLQTSVMNNSLDEVIEGVSEDLSGGGGDDYRISNNYQRRASLPANFNDQDNESQNSPILPSYMAPTESAKARIRAQGSPRLASSLVDNNSVTRRHSLSSSLNVNSDSFSPRSERLVISGRGRIRTDRSLSSLRDGNGTDNKLIQPRWRR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0864 870 SMART iq_5 350 371 IPR000048 GO:0005515
Lal6g0864 870 SMART iq_5 375 397 IPR000048 GO:0005515
Lal6g0864 870 SMART iq_5 327 349 IPR000048 GO:0005515
Lal6g0864 870 MobiDBLite consensus disorder prediction 482 510 - -
Lal6g0864 870 Pfam Protein of unknown function (DUF4005) 770 837 IPR025064 -
Lal6g0864 870 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 136 246 - -
Lal6g0864 870 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 247 857 - -
Lal6g0864 870 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 2 131 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 618 648 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 481 649 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 525 580 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 674 719 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 1 48 - -
Lal6g0864 870 PANTHER IQ-DOMAIN 5-RELATED 136 246 - -
Lal6g0864 870 PANTHER IQ-DOMAIN 5-RELATED 247 857 - -
Lal6g0864 870 PANTHER IQ-DOMAIN 5-RELATED 2 131 - -
Lal6g0864 870 Pfam IQ calmodulin-binding motif 378 394 IPR000048 GO:0005515
Lal6g0864 870 Pfam IQ calmodulin-binding motif 351 369 IPR000048 GO:0005515
Lal6g0864 870 Pfam IQ calmodulin-binding motif 329 348 IPR000048 GO:0005515
Lal6g0864 870 MobiDBLite consensus disorder prediction 25 47 - -
Lal6g0864 870 ProSiteProfiles IQ motif profile. 328 356 IPR000048 GO:0005515
Lal6g0864 870 MobiDBLite consensus disorder prediction 848 870 - -
Lal6g0864 870 Gene3D - 326 374 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 134 162 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 143 157 - -
Lal6g0864 870 MobiDBLite consensus disorder prediction 581 599 - -
Lal6g0864 870 ProSiteProfiles IQ motif profile. 350 379 IPR000048 GO:0005515
Lal6g0864 870 MobiDBLite consensus disorder prediction 674 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0864 Lal-Chr6 5877306 5883594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0864 304 870 IQD Protein Family AT2G02790 32.594 2.13e-60 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0864 - - lang:109339109 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0864 6 5877306 5883594 Lal6g0864 6 5877306 5883594 ECH
Lal6g0864 6 5877306 5883594 Lal19g1483 19 17285666 17291737 ECH