Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0863 ATGGGTAACTGCTTAGATTCATCTGCTAAAATTGATGCAGCTCAAAGCTCTAGGAACACTTCTGCCGGAATCTCAAGAAGTACTCCTTCAAGCTTATCTATTCCATCATATAGTGAAAAAATCAATTCCTTAACAAGTGTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCGCCCAATCTTAAGGCCTTCGCATTCAACGAACTCAAGAATGGCACCAGAAATTTCCGTCCTGACAATCTTCTTGGTGAAGGGGGATTTGGTTATGTTTACAAGGGATGGATTGATGAAAACACATTTACTGCTGCAAAACCTGGATCAGGAATGGTTGTTGCTGTTAAGAATCTTAAGTCTGAAGGTTTCCAAGGTCATAAAGAATGGTTGACCGAAGTTAACTACCTCGGGCAACTGCACCATCGTAATCTGGTGAAATTAATTGGTTACTGCTTGGAGGGAGAGAACCGGCTCTTGGTCTATGAGTTTATGCCGAAGGGGAGCTTAGAGAACCACCTGTTTAGAAGAAAATTGACAGGAGGACCGCAACCGCTTTCGTGGTCAGTGAGGATGAAAGTAGCCATTGGTGCTGCCAGAGGACTCTCTTTTCTTCATAATGCCAAATCACAAGTCATATACCGTGATTTTAAAGCTTCTAACATCCTACTGGATGCTGAGTTCAATGCTAAGCTCTCTGATTTTGGATTGGCTAAGGCAGGTCCTACTGGTGACAGAACTCATGTGTCTACTCAAGTCATGGGTACTCATGGATATGCAGCACCTGAATATGTGGCAACTGGTCGACTGACAGCTAAAAGTGACGTATACAGCTTTGGGGTTGTGTTGCTTGAGCTTCTGTCCGGAAGAGGCGCTGTTGATAAAACAATGGCCGGTGTGGAGCATAATCTGGTGGACTGGGCAAGACCATATTTGGGCAATAAGCGAAAACTATTCCGTATAATGGATACCAGGCTGGAGGGGCAATACCCACAAAAAGGAGCCTTGATGGCTGCCACACTTGCTCTACAATGCCTTAATGGTGAAGCCAAGGCAAGGCCTCCAATGACAGATGTTTTGGAAACTCTGGAACAGATAGAATCCCCGAGAAACCCATGCCGAAACTCCCATTCAGAACATCAAAGGGGAGTCCACACACCTGGAAGACGATCTCCTGCGCCAAACCGATCACCTATGCACCTGACTCCAACCGCTTCCCCACTCGCATCTCACCAGCAATCTGCTCCTGTGCACTAA 1251 0.4588 MGNCLDSSAKIDAAQSSRNTSAGISRSTPSSLSIPSYSEKINSLTSVPTPRSEGEILSSPNLKAFAFNELKNGTRNFRPDNLLGEGGFGYVYKGWIDENTFTAAKPGSGMVVAVKNLKSEGFQGHKEWLTEVNYLGQLHHRNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRKLTGGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRGAVDKTMAGVEHNLVDWARPYLGNKRKLFRIMDTRLEGQYPQKGALMAATLALQCLNGEAKARPPMTDVLETLEQIESPRNPCRNSHSEHQRGVHTPGRRSPAPNRSPMHLTPTASPLASHQQSAPVH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0863 416 CDD STKc_IRAK 83 364 - -
Lal6g0863 416 ProSiteProfiles Protein kinase domain profile. 77 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0863 416 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Lal6g0863 416 SUPERFAMILY Protein kinase-like (PK-like) 52 361 IPR011009 -
Lal6g0863 416 MobiDBLite consensus disorder prediction 395 416 - -
Lal6g0863 416 Gene3D Phosphorylase Kinase; domain 1 53 162 - -
Lal6g0863 416 ProSitePatterns Protein kinases ATP-binding region signature. 83 115 IPR017441 GO:0005524
Lal6g0863 416 PANTHER OS01G0588500 PROTEIN-RELATED 12 413 - -
Lal6g0863 416 Pfam Protein tyrosine and serine/threonine kinase 81 361 IPR001245 GO:0004672|GO:0006468
Lal6g0863 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Lal6g0863 416 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 12 413 - -
Lal6g0863 416 MobiDBLite consensus disorder prediction 366 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0863 Lal-Chr6 5862341 5865587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0863 53 361 Glycoside Hydrolase AT3G07070 52.581 9.32e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal6g0863 PK_Tyr_Ser-Thr 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0863 - - gmx:100809778 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0863 6 5862341 5865587 Lal6g0863 6 5862341 5865587 ECH