Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0861 ATGCAAGATATGAAGAAAAATCAGCAGAAGCAGAAGGAGGTGGTGGTCAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACATGGAATAAAGAGGAGGATGATATACTAAGGGAACAGATTAGCACCCATGGAACTGAAAAATGGTACACTTATTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACATGCTCTTATGCGAGGCACAAAAAGTATTTGGTAACAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAACCGATTCTCTACATTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATTCATCAATTCAAATAACAAGAGGGTTATTTTACAACATGGTTATAATACGGATGCAGAATTAGAATCTGCAGTAGCTAATAAGAAGATGAGGAGGTCCCATATCCGTGACTATGGTGCAGAAAATATCGGCTTTGGTGATAGATCACATAAACAAATTGGAACTCCATTAAATCAACAATCAAGAGCACCATTTGCAGAGTTATCTCAAAACTCTCATAATGTGAACATCTTGCCGGGACTCTTGGTTTATCATGCTTTTGCAGCCCAAAACAACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCGAAGATAAGTGCATTGATGCAACAAGCAGAGTTACTAAGTTCACTAGCTCTAAAAGTTGATGCAAAGAACATGGACCAAAGTCTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTGAATCGAACAAAAGAATCAGACACTCCCAGATATAAGATTCCAGATTTACAGCTTGTAGATCTCAAAGATTTGTTGGAGGACTTAAAGAGTAGTAGTGAGGGAATCCAACCATGTTGGAGGCAAATGGAACTATATCAAGACTCTCCGGACAGTTCTGAATACAGTACCGGATCAGCTATCCTGCCTCATTCTTCTGATGATAATTTGGAACACACTCTGCATCAAGAAATTGGAACTGAACTTAAGTCTATTCAAATTGGAGATGGAGATCAAAAGGTTCTTTCTAGTCCGACATCGAATCAAGATATATTTTCATATTGTGAGGAGCAGATAAACAATGATGGCATTGTTTCTGCCTTATCAAGTGCAGAGTTCAATTCCCCTCTTCAAGTTACACCTATGTTCAGATCCTTAACTGCAGGAATTCCTAGCCCACAATTTTCAGAAAGTGAAAAGAACTTCCTTATGAAAACACTTGGAATGGAGTCTCCATCTCTCAACCTAAGTGCCAAAACCTCACAACCACCACTCTGCAAAAGAACCCTACTACATAGCTTATAA 1353 0.3895 MQDMKKNQQKQKEVVVNEESKKKERHIVTWNKEEDDILREQISTHGTEKWYTYLNSDFKKGGWSPEEDMLLCEAQKVFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSFINSNNKRVILQHGYNTDAELESAVANKKMRRSHIRDYGAENIGFGDRSHKQIGTPLNQQSRAPFAELSQNSHNVNILPGLLVYHAFAAQNNKIQGTFLKKDDPKISALMQQAELLSSLALKVDAKNMDQSLENAWKVLQEFLNRTKESDTPRYKIPDLQLVDLKDLLEDLKSSSEGIQPCWRQMELYQDSPDSSEYSTGSAILPHSSDDNLEHTLHQEIGTELKSIQIGDGDQKVLSSPTSNQDIFSYCEEQINNDGIVSALSSAEFNSPLQVTPMFRSLTAGIPSPQFSESEKNFLMKTLGMESPSLNLSAKTSQPPLCKRTLLHSL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0861 450 Gene3D - 62 131 - -
Lal6g0861 450 SMART sant 59 107 IPR001005 -
Lal6g0861 450 CDD SANT 63 104 IPR001005 -
Lal6g0861 450 PANTHER TRANSCRIPTION FACTOR MYB88 10 447 - -
Lal6g0861 450 MobiDBLite consensus disorder prediction 1 21 - -
Lal6g0861 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Lal6g0861 450 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
Lal6g0861 450 PANTHER MYB PROTEIN-RELATED 10 447 - -
Lal6g0861 450 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Lal6g0861 450 SUPERFAMILY Homeodomain-like 48 113 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0861 Lal-Chr6 5843760 5850342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0861 49 450 MYB Transcription Factor Family AT1G14350 52.670 7.67e-128 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal6g0861 Myb_DNA-binding 3.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0861 K09422 - gmx:100807667 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0861 6 5843760 5850342 Lal6g0861 6 5843760 5850342 ECH