Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0850 ATGGAATTGGAAGCTGATCATCAAAATGGGATCCGAAGCAGACCCAATTTCCCACTTCAGCTATTAGAGAAAAAAGATAATGATATTTCATCAGAACACCCTTGTTCCACCACCGCAAACGACGGCAGTAGCGGCGGCGGCGCAGACATCAACAACAGCCTCAGCTGCGGGGATCAATCTAAGAAGCCACCGCCAAAGCGAACCTCCACCAAGGACAGGCACACCAAGGTTGATGGCCGCGGTCGCCGGATCCGCATGCCGGCCGCCTGCGCTGCCAGGGTATTCCAGCTGACGCGGGAACTCGGCCACAAATCCGACGGCGAGACTATTGAATGGCTTCTCCAGCAGGCCGAGCCTGCTGTGATCGCCGCCACCGGCACCGGCACCATCCCGGCAAATTTCACCTCCCTCAACATCTCCCTCAGAAGCTCCGGCTCCACCATGTCGGCGCCGTCTCACTACTTCCGGGGAAACTACTTCAATCCTAGCACGTTCTCATCCAACGCTGCTGCGGGACAGTTAAGGAACCGCGGAGAATGGGAGTGGAACATGAACAATAACAACAAGAACATGCTCATGGAAGATTCTCGTAGGTCTACCATGTTGTTTCCCGGTTCCTCAGAGAATTCTAATTCCAATATCACATCGCTTTTGAATTTCAACCCTAATGTCAATGCCATGCTACAAACCAAACAAGAAGAACCTGGCAGCGGTGGCGGTAGTCTTGAATTAATGGCCAGTGATTCTGATGCAAGTTTAGGAAGAAAAAGAAGGCAAGAACAACCAGAAGTGTCACATATGGGAAGCTATTTATTACAATCTAGTACGTCGGGGTCGATTCCGGCGAGCCTCACTTCCAATTCGGCGACTTTTTGGATGGTGGCGGGTAACAGTAACCAAGGCATGAGCGGTGGTAACAATGGTGGTGATCCAATTTGGGCCATTCCCTCTGTTGCTGGGAATAGTGGAATGTATAGAGGTACCATGTCAAGTGGTGGGATTCATTTCATGAACTTTGCTTCTCCAATGCCACTTATGCCCGGTGGTGGACAACTAGGTCCAGGGATGGGTGGTGGCGGTGGCGGCGGTGCTGCAATGGTAAACGAAAGTAACTTAGGTATGCTTGCAGCACTTAATGCTTATAGGCAGATGCAGGCCAACGGCGTACCGGAGTCTCCGGCAAGTACCGGGCATCATCAGGGAGGAGATGATGGGCATGACACAAGCAGTCAACATTCCTAA 1242 0.5177 MELEADHQNGIRSRPNFPLQLLEKKDNDISSEHPCSTTANDGSSGGGADINNSLSCGDQSKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSTFSSNAAAGQLRNRGEWEWNMNNNNKNMLMEDSRRSTMLFPGSSENSNSNITSLLNFNPNVNAMLQTKQEEPGSGGGSLELMASDSDASLGRKRRQEQPEVSHMGSYLLQSSTSGSIPASLTSNSATFWMVAGNSNQGMSGGNNGGDPIWAIPSVAGNSGMYRGTMSSGGIHFMNFASPMPLMPGGGQLGPGMGGGGGGGAAMVNESNLGMLAALNAYRQMQANGVPESPASTGHHQGGDDGHDTSSQHS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0850 413 MobiDBLite consensus disorder prediction 32 63 - -
Lal6g0850 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 413 IPR005333 GO:0003700
Lal6g0850 413 MobiDBLite consensus disorder prediction 230 266 - -
Lal6g0850 413 MobiDBLite consensus disorder prediction 64 82 - -
Lal6g0850 413 Pfam TCP family transcription factor 68 195 IPR017887 -
Lal6g0850 413 MobiDBLite consensus disorder prediction 1 82 - -
Lal6g0850 413 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
Lal6g0850 413 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 4 413 - -
Lal6g0850 413 MobiDBLite consensus disorder prediction 385 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0850 Lal-Chr6 5748858 5750099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0850 60 352 TCP Transcription Factor Family AT3G47620 46.084 6.70e-56 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal6g0850 TCP 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0850 - - gmx:100809966 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0850 6 5748858 5750099 Lal6g0850 6 5748858 5750099 ECH