Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0835 ATGAATCAACAAAATATGCAAAACCAAAGTGTACATTCTGTTCTATCCACTGATGCAAAACCAAGGCTAAAGTGGACTCCTGAACTTCACCAAAGATTCATTGAGGCAACTAATCAGCTTGGAGGATCAGAAAAGGCAACCCCAAAGAGTATTATGAAGATTATGGGGATTCCAGGACTTACTTTACTTGGGAAAAGCCAACAGGTAGAAACCTGTTCTGACAACAATCAACAAGATTACAAAGAGATCAAGTGCAGTGATGATCATTGCAGCAAGGAAATCAGTGTTGGGGCCCAGAATCATATTCCTGAAAACTTGCAGGTAACTCAGGCTCTTCAAATGCAAATGGAAGTTCAAAGGAAACTTTATGAACAAATTGAGGTACAAAAAAATTTGCAACTTAAAATTGAAGCTCAAGGACAGTATTTACAATCAGTACTAAATAAAGCACATGAAGCACTAGGTGGATACAATTATTCCACAGTAGGAATAGAACTCACAAGAGCTGAACTTTCTCACCTAGAGACAATAATCAACAATGCTTCCCCAAGTTCTCCAATTTCAGAACTAACAGAAGCCAAAGGATTAAGTTTGCACTGTGGTAAGAGGAAAAAAGATAGAGGTACTATGTGTTCACTTGAAAGTTCTTTGACATCTTCTGATAGCTGTGGGAGAAAGAAAGAGAAAAATCCTATGGAATTTAATACTACTTTAGTGGAATTACCATTAGTGGATATTAAGCATGAAGATAAAGGATCAAATGGTGCAACTGATTCTGATGGTAGCTGTGTTGAACAAGAATGTGGTAAAAGAAGTGGCAACAAGTTGAAGAAACCCAAGTTGTTGGAATTGATTGATTTGAACAACCAATATGAGAGTGACATGGACTCAGGTTCAAAAACAACATTAGACTTAAATTGCAGTTCAAGCTTTTAG 936 0.3697 MNQQNMQNQSVHSVLSTDAKPRLKWTPELHQRFIEATNQLGGSEKATPKSIMKIMGIPGLTLLGKSQQVETCSDNNQQDYKEIKCSDDHCSKEISVGAQNHIPENLQVTQALQMQMEVQRKLYEQIEVQKNLQLKIEAQGQYLQSVLNKAHEALGGYNYSTVGIELTRAELSHLETIINNASPSSPISELTEAKGLSLHCGKRKKDRGTMCSLESSLTSSDSCGRKKEKNPMEFNTTLVELPLVDIKHEDKGSNGATDSDGSCVEQECGKRSGNKLKKPKLLELIDLNNQYESDMDSGSKTTLDLNCSSSF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0835 311 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 311 - -
Lal6g0835 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 311 IPR044848 GO:0003700
Lal6g0835 311 Pfam MYB-CC type transfactor, LHEQLE motif 106 152 IPR025756 -
Lal6g0835 311 SUPERFAMILY Homeodomain-like 19 62 IPR009057 -
Lal6g0835 311 MobiDBLite consensus disorder prediction 249 272 - -
Lal6g0835 311 Gene3D - 19 64 - -
Lal6g0835 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 61 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0835 Lal-Chr6 5642819 5644976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0835 14 306 G2-like Transcription Factor Family AT1G69580 43.789 2.66e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal6g0835 Myb_CC_LHEQLE 2.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0835 - - gmx:100787178 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0835 6 5642819 5644976 Lal6g0835 6 5642819 5644976 ECH