Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0834 ATGTCATCGGAGCCAGAGGTTTCTGAACTCACCTCTCTGTTTCAAAGGTTATTGCGAAACAGAGACATGTCTTTGTTCTTACCCTTCATCTTTGGTTTCCCAGAATCATCACCATCAACGGGAAATAACGAAGACCCATATCATGAAAATGATGATACTCAAGATTCCCATAGTCAAAGAATCATCTTGCTGAACCCTTTTACACAGGGCGTGGTGGTGGTTGATGGTGCTTCAAGCCTTGAGAATCTGTTTCGTGAACTTGGGAGTAGCAAAAGTGGACAACCACCAGCTTCAAAAGAATCAATTGAGGCCATTCCAAGTGTGGGAATTGTAGAAAGTGATGATCTTGGGGAGTGTGTGGTTTGTTTGGAGGAGTTTGAGGTTGGTGGGGTAGCAAAAGTTATGCCTTGTAAGCATAAATTTCACCCTAATTGCATTGAGAAGTGGCTTGGGATTCATGGGAATTGTCCTGTTTGTAGGTATCAGATGCCTGTTGAGGAGAAAGGTAGGGACATGAAAAGGGATGAGGAAGAAGGGGGAGGAGAGAGAAGGAGGATTGGTGATGCTGAAGTTTGGGTTAGTTTTTCTATTAATGGAGGAAGTAGGAGAAGCCATGATTCAAATCAAGCCCCTTCTGGTGATTCCAGTGATAATTTATATAGTCCTAGTGATGCTTCCGAGTTAGAGAATTAG 693 0.43 MSSEPEVSELTSLFQRLLRNRDMSLFLPFIFGFPESSPSTGNNEDPYHENDDTQDSHSQRIILLNPFTQGVVVVDGASSLENLFRELGSSKSGQPPASKESIEAIPSVGIVESDDLGECVVCLEEFEVGGVAKVMPCKHKFHPNCIEKWLGIHGNCPVCRYQMPVEEKGRDMKRDEEEGGGERRRIGDAEVWVSFSINGGSRRSHDSNQAPSGDSSDNLYSPSDASELEN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0834 230 ProSiteProfiles Zinc finger RING-type profile. 119 160 IPR001841 -
Lal6g0834 230 Pfam Ring finger domain 118 160 IPR001841 -
Lal6g0834 230 SMART ring_2 119 159 IPR001841 -
Lal6g0834 230 CDD RING-H2_PA-TM-RING 118 160 - -
Lal6g0834 230 MobiDBLite consensus disorder prediction 197 230 - -
Lal6g0834 230 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 10 169 - -
Lal6g0834 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 166 IPR013083 -
Lal6g0834 230 PANTHER - 10 169 - -
Lal6g0834 230 SUPERFAMILY RING/U-box 111 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0834 Lal-Chr6 5640868 5641560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0834 1 215 C3H Transcription Factor Family AT1G26800 47.273 2.56e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0834 - - lang:109356689 341.658