Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0807 ATGTTTGGGTTCAGAAAAGCACCACCCTCAAATCCTGCTTCTGGTTCAGACAATGAATCACAAAAGAAGACAACCCTTACTCCAGATAGACGAACGGCTTCAGAACCTGTTGTGGTACCAAAATCTAAAGGAAACTATTTTGATGACGACGACGATGATGATGATTGGGGGAGAAAGCCTTCATCCACTGCATCCTCATCAGTTGGTTCAAAAGACAGGTATAAAAACGGTTTCCGCGACTCGGGGGGGCTAGAGAACCAAAGCGTTCAGGAGCTAGAAAACTATGCAGTGTACAAGTCTGAGGAGACAACAAATAGTGTTAACAATTGTCTAAGGATTGCTGAGAATATCAGAGAAGATGCAACAAAGACCCTTGATATGTTGCACCAGCAGGGTGAGCAGATAACAAGGACTCACAATATGATTGTTGAAACAGAAAAAGATTTGAGTAAGGGTGAAAAACTCCTCAACAATCTCGGGGGCATGTTCTCCATGCCGTGGAAGCCGAAGAAGACCCGCGAAATTCAAGGCCCTGTAATCACAGCAGATAAGGCATCCAAGAAGAATATAGGAAGTAAGGAAGACAGGGAAAAGTTGGGGTTAGCTCCTCTGCCTAAGGGGCGTTCTGCTCCTACTACACCTCCTAATGAATCAGCCAATGCCTATCAGAAAATTAATGTTCAGAAAACCAAACAAGACGATGCACTCACAGACCTGAGTGATATCTTGGGCGATTTGAAGGGCATGGCAGTTAATATGGGAAGTGAACTCGACAGGCAAAACAAAGCTCTTGATCATCTTGATGCCGATGTCGATGAGATGAATTCTCGAGTTAAAGGTGCCAACCAACGTGCGCGCAAATTAGTAGGGAAGTGA 876 0.4452 MFGFRKAPPSNPASGSDNESQKKTTLTPDRRTASEPVVVPKSKGNYFDDDDDDDDWGRKPSSTASSSVGSKDRYKNGFRDSGGLENQSVQELENYAVYKSEETTNSVNNCLRIAENIREDATKTLDMLHQQGEQITRTHNMIVETEKDLSKGEKLLNNLGGMFSMPWKPKKTREIQGPVITADKASKKNIGSKEDREKLGLAPLPKGRSAPTTPPNESANAYQKINVQKTKQDDALTDLSDILGDLKGMAVNMGSELDRQNKALDHLDADVDEMNSRVKGANQRARKLVGK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0807 291 MobiDBLite consensus disorder prediction 187 202 - -
Lal6g0807 291 Gene3D - 223 290 - -
Lal6g0807 291 Coils Coil 257 284 - -
Lal6g0807 291 Gene3D - 83 161 - -
Lal6g0807 291 SMART tSNARE_6 92 159 IPR000727 -
Lal6g0807 291 SMART tSNARE_6 221 288 IPR000727 -
Lal6g0807 291 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 226 288 IPR000727 -
Lal6g0807 291 Coils Coil 111 131 - -
Lal6g0807 291 MobiDBLite consensus disorder prediction 183 219 - -
Lal6g0807 291 SUPERFAMILY SNARE fusion complex 219 288 - -
Lal6g0807 291 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 291 - -
Lal6g0807 291 MobiDBLite consensus disorder prediction 1 86 - -
Lal6g0807 291 SUPERFAMILY SNARE fusion complex 87 158 - -
Lal6g0807 291 CDD SNARE_Qc 231 287 - -
Lal6g0807 291 CDD SNARE_SNAP25N_23N_29N_SEC9N 94 158 IPR044766 GO:0005484|GO:0031201
Lal6g0807 291 PANTHER SNAP25 HOMOLOGOUS PROTEIN SNAP30-RELATED 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0807 Lal-Chr6 5428193 5430454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0807 216 291 SNARE and Associated Proteins AT3G09740 38.158 6.48e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0807 K18211 - gmx:100804448 461.07